Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2583 |
Symbol | fliN |
ID | 8133531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2952148 |
End bp | 2952561 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644865867 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_003018150 |
Protein GI | 253688960 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACA CCAAGAAACC GTCCGACGAC AAGGAATCAG TGGACGATCT GTGGGCTGAT GCATTTAACG AGCAACAGGC TGCAGAAAAA CCGGCCGCGA CAACCGAAGG CATTTTCAAA TCGCTGGAAG GTCATGATCC GCTGGGTGCC TTACAGGATA TCGATCTTAT TCTGGATATT CCTGTCAAAC TCACCGTTGA GCTTGGCCGG ACAAAAATGA CGATAAAAGA GCTTCTGCGT CTCACCCAAG GTTCTGTTGT CGCACTTGAT GGCTTGGCTG GTGAACCGCT GGATATCCTG ATCAATGGTT ATCTCATCGC TCAGGGTGAA GTTGTCGTCG TATCTGACAA GTATGGTGTG CGTATTACCG ACATCATCAC ACCATCCGAA CGTATGCGCC GCCTGAGTCG TTAA
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Protein sequence | MSDTKKPSDD KESVDDLWAD AFNEQQAAEK PAATTEGIFK SLEGHDPLGA LQDIDLILDI PVKLTVELGR TKMTIKELLR LTQGSVVALD GLAGEPLDIL INGYLIAQGE VVVVSDKYGV RITDIITPSE RMRRLSR
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