| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2580 |
|---|
| Symbol | |
|---|
| ID | 8133528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 2949206 |
|---|
| End bp | 2950501 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644865864 |
|---|
| Product | flagellar hook-length control protein |
|---|
| Protein accession | YP_003018147 |
|---|
| Protein GI | 253688957 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3144] Flagellar hook-length control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.549964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGT CCGCGTTACC CATAGCGACT ACTGTCAGTG ATACGAGCAG TTCTTCTGCT
TCTCTGCTGA CACAGGGCGA GCTGCCAAAA GATTTTGTTG ATCTGTTGAG CAAACGCATA
TCGCAAATAG CCGATACATC GGATAAAAAA ACACTCGAAA AAGTGGACGA AGAAGCGCTG
CTAAACGCTT TAGGGAAAGA TGCTGCTTCC CTCAGCCGCG ATGATTTAAA CGCGTTGCTC
TCTTCGTTCA GTTCACTTAC TGGCGCAGCC ATTACTGCGG GTAAGCAAAA TCCAGACATT
GCCGAACAGG CGAAGCTTAA GGGCTTGGAC AAGAAAGACA GTACCAGTAC GTCAGATGAC
GCCATCGCGA TGCAGGCGCT GCTTGCTATG TTGCAGACAA CGCCACTTGC GACGCAGCCT
GCCACTGATA GCATTGCCGC GACTGCCGTA AATGCGGGAT TAACGATTCC GGGGCTCATT
GACGCAAAAC GCCAGAATGA GGCTCCTACT TCTGTACTGA ACAGTACGGG TGAGAATGCC
AAAAGTACCT TGGCAAAGCT GCTAGACACA TCAGTAATGC CTGATAAAGA TGCGGGTATA
TCACGCGATC TGCGCCATGC AGCCAAACAA ACCTCATCTC CTGCGACAGA GTCAGCAGAT
GACGCAGCCA AGTTTGCGCT AACGACGCCA AATTCCCTAG TAGGCGATCG CAATGCCTCT
GAATCGGTGT CCACCTTAAG CAACAGCGTG TCTCAAACCA CACCGCCTGT CGCACAGGCT
ATGCATATTC AGCCAGCAGC AGTGGGGACG ACCACACCAG CACCTCAGGC AGCAAGCGCG
CAGTTGAATG CACCGTTTGG CTCACCACAA TGGCAAGACG CATTGGGACA GCAGATAGTG
ATGTTCAGCC GTAATGGACA GCAGACTGCG GAACTACGTT TGAACCCGCA GGAACTGGGC
GCTCTGCACA TCAGCCTAAA AATTGATGAT AATCAGGCAC AGATTCATCT GGCATCAGCA
AGCAGTCAGG TTCGTTCAGC ACTGGAAGCT GCACTGCCCC ACCTGCGTAA TGCGATGGCA
GAAAGCGGAA TTAACCTTGG CCAAAGCAGC GTAGGGAGTG ATTCCTCTGC CTGGCAACAG
CAAATGGCCA GTAATAATAA CGACGGCAAT AACCGTGGCC CGTCTTATCA GCAGCAATTT
GGTCATTCAG CAGAAGGCAC GGGTGAATTA CTAAATGTAC CAGAACAGTT AAGATCAATG
GCGTCATCGG TCAACGGCGT TGATATCTTT GCCTGA
|
|---|
| Protein sequence | MNLSALPIAT TVSDTSSSSA SLLTQGELPK DFVDLLSKRI SQIADTSDKK TLEKVDEEAL
LNALGKDAAS LSRDDLNALL SSFSSLTGAA ITAGKQNPDI AEQAKLKGLD KKDSTSTSDD
AIAMQALLAM LQTTPLATQP ATDSIAATAV NAGLTIPGLI DAKRQNEAPT SVLNSTGENA
KSTLAKLLDT SVMPDKDAGI SRDLRHAAKQ TSSPATESAD DAAKFALTTP NSLVGDRNAS
ESVSTLSNSV SQTTPPVAQA MHIQPAAVGT TTPAPQAASA QLNAPFGSPQ WQDALGQQIV
MFSRNGQQTA ELRLNPQELG ALHISLKIDD NQAQIHLASA SSQVRSALEA ALPHLRNAMA
ESGINLGQSS VGSDSSAWQQ QMASNNNDGN NRGPSYQQQF GHSAEGTGEL LNVPEQLRSM
ASSVNGVDIF A
|
|---|
| |