Gene PC1_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2573 
Symbol 
ID8133521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2942732 
End bp2943112 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content44% 
IMG OID644865857 
Productflagellar biosynthesis protein FliT 
Protein accessionYP_003018140 
Protein GI253688950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.694894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCCC CCCATCGGCT TCTAAAAGAT TACCAACAGC TTTTGTCTCT GAGTCAAAAA 
ATTCTTCATT TGGCAGTCAA CGGCCAATGG GATACGTTGG TTGAGCAAGA GATTGTTTAT 
GTTCAGTCCG TTGAAGGCTT AGTTAACACG CCAATTCCTG ACGAAATTGA CAGTGTGATG 
CGTCTGCATC TGCGACAAAT TTTGCAGGAA GTGATGGATA ATGAAGCGAA AGTAAAACAA 
CTTCTGCAGA AGCGGATGGA CGAGTTAAGT TCGTTAATGG GACAGTCACT GAAGCAAAAG 
TCAATTAATA CGACTTATAA CGAATTTGCG GGGCAGAGAA TGCTGCCTGG TGATGCCTTA 
CCTGATGAAA CACGCTCATA G
 
Protein sequence
MASPHRLLKD YQQLLSLSQK ILHLAVNGQW DTLVEQEIVY VQSVEGLVNT PIPDEIDSVM 
RLHLRQILQE VMDNEAKVKQ LLQKRMDELS SLMGQSLKQK SINTTYNEFA GQRMLPGDAL 
PDETRS