Gene PC1_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2572 
SymbolfliS 
ID8133520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2942322 
End bp2942732 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content49% 
IMG OID644865856 
Productflagellar protein FliS 
Protein accessionYP_003018139 
Protein GI253688949 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.680491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAACA TGAAAGGCAG CCAAGCCTAT GCTCAGGTAG GCCTTGAAAG CAGCGTGATG 
AGCGCAAGCC CTCACCAGCT TATCGTCATG CTGTTTGATG GTGCGCGCAG TGCGATGATT 
CGCGCGCGCA TCCTCATGGA ACAGGGCGAT ATCCCAGGCA AAGGCATGGC GTTATCTAAA 
GCAATCAACA TTATCAATAA CGGACTCAAA GCCGGGTTGG ATATGGAAGC CGGGGGCGAA 
CTCGTTGAAA ACCTGTCCGC TCTGTACGAC TACATGTCCC AGCGTTTGTT GATTGCCAAT 
TTACATAACG ATGCAAAAGC GATAGAAGAA GTTGAAGTGT TGTTGGAAAA TATCGCTGAT 
GCCTGGCGGC AAATCGGTCC TAATTACAAA CCAGAGCAGG AAGTACGTTA A
 
Protein sequence
MYNMKGSQAY AQVGLESSVM SASPHQLIVM LFDGARSAMI RARILMEQGD IPGKGMALSK 
AINIINNGLK AGLDMEAGGE LVENLSALYD YMSQRLLIAN LHNDAKAIEE VEVLLENIAD 
AWRQIGPNYK PEQEVR