| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2571 |
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| Symbol | fliD |
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| ID | 8133519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2940871 |
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| End bp | 2942295 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644865855 |
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| Product | flagellar capping protein |
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| Protein accession | YP_003018138 |
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| Protein GI | 253688948 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGTA TTTCTTCATT AGGTGTGGGT TCAGGACTAC CTTTAGACTC ATTGCTAACA
CAGCTTAAAA CCGCTGAAAA TCAAAAGCTT GTACCAATAA CAACCCAACA GTCGAGCTTC
AAGGCCCAAC TGAGCGGTAT CAGCGCCCTG AAAAGTGCGC TTGATAAACT CAAAACAGCG
AACGATGCTT TAGCGATCTC TGAATCTTTC GGCATTGTTA AAGGTTCAAT TGATGGCATC
ACATCAACCA AAGTTTCCAG CACAAACAAA GCATTCTCTA CCACCACCGA TAGTAAAGCG
GTGGCGGGTA CCTATAGCAT TGACGTGAAA CAATTAGCAC AGGCACATTC AATAACGTCA
ACGGCCAAGA CTAGCGCCAC AGAGCCCTTG AGTACAACAG ATACAAAACT CGTTATTTCC
CAAGATAACG GTAAATTCAC TAAAGTCGGT GATGATTACC TAAAATATCT GGAAATAGAT
ATCAAAGCGG GCGAAACATC GTTGAACGAC GTTCGTGACG CTATTAACAA AGTCAATGGC
ACCGTAACAG CAAGCGTCGT CAAAGCCAAA GATAATGAGT ACTACCTGAT GCTGACCGCC
AAAAACAGCG GTACTGAGAG TAAAATCTCT ATCGGGGGAG ACGACACGAG CGTTTTTAAT
GGTACGCCGA CAGAAAAAGT CGCGGCCAAA AACGCACAAA TCACGGCAAA CGGCATTGAG
ATCGAAAGAC AAAGCAACGC AATCTCTGAT GCTTTCGAAG GCGTCACGAT CAATCTTCTG
GCTCAAACAG AGACAGGCAA ACCGGAAACG CTGACGATTG AGCAAGATAT CACCGGGATG
AAGGATACGA TCAAAGCCTG GGTTGATGCT TACAATGCGC TGCAAGACAC CATTTCAGCT
CAAACAAAAT ATACTGCAGT TGAAGCAGGC GAATCGCAAG TAAGCTCCAA CGGCGCGTTA
TTAGGCGATT CTACGGTTCG TGGTATCCAG AGCAAGCTCA AGGCGCAGCT AACAACGGTA
CAAAGCGGCG GTGACGAATT CCGTATTCTG GCAGATCTTG GTATTACGCA AAACTTCAAA
ACAGGGAAGT TAGAAATCAG TGATACCAAG TTAGAAAAAG CGCTGAAAGA AGAACCCGGT
AGAGTTCGAG ACTTTTTCGT TGGTGATAAT GATAAAACAG GATTTGCGAC ACAGACTCGT
ACATACCTGA AGGAAGTCCT TGATACGTCA GAAGGTCTCA TTAAAACCAA AGAAGATGGT
ATTAATAGTT CGCTGAAAAA ACTGGATACT CAGGCTGCGC GTGTCCAAGA TGCAATAGAA
AGTACAATTG CTATTTATCA AAAACAATTC GTCGATCTTG ATAAAGCGAT GACTGACATG
AATAGCACCA TGAGTCGTTT AACGAGCATG TTCTCTAAAC TCTAA
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| Protein sequence | MASISSLGVG SGLPLDSLLT QLKTAENQKL VPITTQQSSF KAQLSGISAL KSALDKLKTA
NDALAISESF GIVKGSIDGI TSTKVSSTNK AFSTTTDSKA VAGTYSIDVK QLAQAHSITS
TAKTSATEPL STTDTKLVIS QDNGKFTKVG DDYLKYLEID IKAGETSLND VRDAINKVNG
TVTASVVKAK DNEYYLMLTA KNSGTESKIS IGGDDTSVFN GTPTEKVAAK NAQITANGIE
IERQSNAISD AFEGVTINLL AQTETGKPET LTIEQDITGM KDTIKAWVDA YNALQDTISA
QTKYTAVEAG ESQVSSNGAL LGDSTVRGIQ SKLKAQLTTV QSGGDEFRIL ADLGITQNFK
TGKLEISDTK LEKALKEEPG RVRDFFVGDN DKTGFATQTR TYLKEVLDTS EGLIKTKEDG
INSSLKKLDT QAARVQDAIE STIAIYQKQF VDLDKAMTDM NSTMSRLTSM FSKL
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