Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2569 |
Symbol | |
ID | 8133517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2936082 |
End bp | 2939513 |
Gene Length | 3432 bp |
Protein Length | 1143 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644865853 |
Product | Methyltransferase type 11 |
Protein accession | YP_003018136 |
Protein GI | 253688946 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTAG ATACTGCCGC CAGCCATCCA ACAACGAGCG CTGCTGATCG CTGTCCTTTG CCTTATACCT CACCGACGCA TTTGCAGGCA GTAGCATACT TGCATGGCAT TGTGGCAGCG GATCCTGATA GAGCACGGGT ACTGGAACTG GGATGCGTGA GTGGCGCGAA CCTGTTGCCA TTTGCTACTG CTTATCCGCA GGCGCAGGCT ATTGGTATCG ATCTTGATGA GGAAAAAATT GCGCAAGGGC AGATGTGGGT TCAGCAATAT GGATTAACCA ATCTGCAACT CCAGGCAATG GATTTGGCAT CGCTTTTGGA CAGCCATCTT GGCAAATTTG ATTATATCAT TGTCCATGGT GTTTTCGGAC TGGTTAGCGG CGAAGCTCGC TCGGCGTTGT TAGCATATTG TCACCGTCAT TTAAGTGCAA AAGGCGTGGT GTGTTTTTCC TATTCGACCT ATCCTGGCGG GAAGACAGAG GAAATTCTGC AGGATGCTTT AAATCTGCAC GCGAGTCTGG CAGAAACACC GGAACAACAG CAAGCCAGCG CAAGAGCCAT GTTGAGCTAT TTATCGCTGG GCATGTCTGC AAATAACCCT CAAAGAGCCG CTATTGCGAC TCTGGTTGAA GAAGCCGAAC AACTGGGCGA TGTGTCGCTA GCGCTCAACT ATCTACAAGG CCTGAATCAA CCCTGCTATC TGCTCGACTT TAATGCACTG ATTAAGCAGG AAGGCTTGGC TTATGTTGGC GAAATTGAGC CTCACACTGA GATTGCCTCT CACTATGGTG ACCAGGTAGA TAACTTACTG CGCACGATCT GTCCGACTGG CAATAAGATA TTGAAACAGC AGTATCTGGA TTTTAACGTT GGACGTAAAC GTCGGTTTAG TCTGCTGGTC GCTGCTGAAC GGGCGGAAAA GTTGGAATCG GAAATTGATG TCTCGCGGCT GGATAAACTT TCCTGGGCCG GGAGTTTCCG CCGTAGCATG TTGAATAAAG GTTTGGCGTC CAACGCTTAT TCGACTAATA CTGGAATACA GATATCGACC GATCACGAAC TTACCCAGCA AATTCTGGAT GTCTTAGGTA ATGCGTGGCC TGCGAGTGTT TCCTTTAAGG AACTGATATT TAATACGCAT TTTCCTGAGA AAGAAAATGA TAAACACGAA CATGAAAACA ATGTGCGTGA ATCCCTTTAT GCTTTGTTAA AGCAAGGGTT ATCGAGCATT CATTTCTGTG TCGGTGAATG TGCTTATCGT AAAAGCGAAT TCAGTACGCT GCGAGTATTA CCGAATTGTG GGGGTAATTA TCCAGTATTT AACTACTGGT ATGAGTCTTT CACTTTACCG TCAGAGGCCC AAGGGCTAAA AATTCCGATG GACTTATTAG ATGAGCAGAA CGAGGGCTCA TTAGCGCTGC TGGATGAATT GCATCATAAA GGTCTGATGG TCGGCAGCGC TCTGGCGTGG CAACGTTACT TCCAAAAACG TTTGGAATTG GCGAAGGACG TCAAGGAAGT AATCCATAAT ATCAATCCGT TGCTCATATA TTCCAGCAAC GCGAGTGGCG GTGGCTTATT CAAGGCTAGT GACGCTATAA AGGTTGAAAA AAGCCGAAAA GAATTCGTTA ATAACGCGAT TGATGCGAAA GTCAAACATC AATTATATGA GTTATTAAAG CAACAGAAAT ACAATGAAGC TCGTTCTCTG GCAGAAGAGT TGACGATAAA ACAGCCGAAT AATTTACAGA ATTGGATTAC GCTAGAGAGA ATTAACTTCG TTACTGGGGA TAAAAATGCG GCAATATTCT CTTTGGCGAA AGTTATTTCC ATGTATAGCA ATGCATGGTT GGTCTATAGT GAATTATCTA GTTTGTTGCA CAATACATAT CATTATTGGG AAGCAATTAA CTTAGCCTAC AAGGTTATTC GTTGTGATAG CAACGTTGCT GTCGCCTGGA ATGTGGTGGC GCTTGTTTAT TTAAAATTCG AAAATATGTC TGGGGCTGAA GTCTGTCTAG AAAAAGCGAT GCAACTTCTA CCTAACGATG CGGCAATACT GAATGGTATG GCGATGGTGT TGGATAAAAA ATCCAATGTC GAAAGTGCAA TTGATTATTA TCGCCGAGCG GTTGCCGCAG CTCCAGATGA TTTAAGTATA TACAGTAACC TTTTATTTGC TTTACTACAT AATGCCAATA TCCCGGCTTC AGAGGTTTTT GCTGAGCATT TATTGTATGG CGAAGCGGTA GAAAAACGGA TTGGTGCGAG TACACCTGTA CACTATCTAC AAAATAAAGA TCCCAACAGA GTATTACGTA TTGGTTTTGT TTCTGGCGAT TTATATTCAC ATCCCGTCAG CAAATTCTTA TCGCCGGTAT GGAATGACAT AAACCCTCAA CACTTTGCCC TTTATGCCTA TTCCACATCA CATCATTATG ATGAAGTGAC TCGTATGCTG GAAGAACGTT CAGCTGTGTG GCGTAACGTG GCGAGCAGTA GCGACACGGA ATTATTCGAA CTGATTAAAC AGGATGAGAT AGATATTCTT TTCGATCTTT CCGGTCACAC TGGCGATAAC CGCTTGTCAA TGTTCGCTAT GAAGCCTGCA CCGATCCAGA TTAGCTGGAT TGGTTACCCG GGAACGACGG GATTAAAAGC GATGGATTAC TATCTGGTCA TGAACCATGC CCCATATCCA GAAGTTTTAG CCCATCAATT TACTGAAAAA TTACTGTATG TGCTATTTGA CCGACAATTT GAACCGGTAG TTAATGGCCC TGATGTTAAC GATCTTCCTG CGTTGAAAAA CGGTTATCTC ACGTTCGCCA GCTTCAACAG ACCGACTAAG ATTAACGATA CGGTATTATC GGCATGGGGA AAAATCCTCG TTCAGTTACC AACCAGCAAG ATGATTATTG GTGCGTTGCC TAGCCAGCAG TCGAGAGAAC ATATACGTAA AAGGTTAGAG TCGCAGGGTG TTCAACCTGA TCAGCTGATT TTCCGCGAAC GTGTCAACAT AATGAGTTAT CTGGCTATGC ACCAGGAAAT TGATGTGCTG CTGGATACGT TCCCCTATAC CGGGGGAACC ACGACGAACT ATGCGTTATG GATGGGCGTG CCGACTCTGA CGCTAGCCGG TGAAACCTAT GCTGCTCGCC AAGGGGTGGT AAACCTTGGC CAGGCTGGTT TGAATGAGTT TATTGCAGAT TCAGAAGCTG ACTATATCGA CAAGGCTATT TCCTGGAATA ACCGGTTGGA TGAACTGAAT CAAATTCGCC ATAGTTTACG CAAGAAAATG GCGCATGACG TCGGTGCTGA TAATGTAACC GCCGCCACCT ATTTCGAGCA GGCGCTAAGA ATGGTATGGA AAGCTTACTG TGCCGGTGAG CCGCCTAAGA GTTATGCGAT AGGTCACTCA CCGGTGCCAT GA
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Protein sequence | MTLDTAASHP TTSAADRCPL PYTSPTHLQA VAYLHGIVAA DPDRARVLEL GCVSGANLLP FATAYPQAQA IGIDLDEEKI AQGQMWVQQY GLTNLQLQAM DLASLLDSHL GKFDYIIVHG VFGLVSGEAR SALLAYCHRH LSAKGVVCFS YSTYPGGKTE EILQDALNLH ASLAETPEQQ QASARAMLSY LSLGMSANNP QRAAIATLVE EAEQLGDVSL ALNYLQGLNQ PCYLLDFNAL IKQEGLAYVG EIEPHTEIAS HYGDQVDNLL RTICPTGNKI LKQQYLDFNV GRKRRFSLLV AAERAEKLES EIDVSRLDKL SWAGSFRRSM LNKGLASNAY STNTGIQIST DHELTQQILD VLGNAWPASV SFKELIFNTH FPEKENDKHE HENNVRESLY ALLKQGLSSI HFCVGECAYR KSEFSTLRVL PNCGGNYPVF NYWYESFTLP SEAQGLKIPM DLLDEQNEGS LALLDELHHK GLMVGSALAW QRYFQKRLEL AKDVKEVIHN INPLLIYSSN ASGGGLFKAS DAIKVEKSRK EFVNNAIDAK VKHQLYELLK QQKYNEARSL AEELTIKQPN NLQNWITLER INFVTGDKNA AIFSLAKVIS MYSNAWLVYS ELSSLLHNTY HYWEAINLAY KVIRCDSNVA VAWNVVALVY LKFENMSGAE VCLEKAMQLL PNDAAILNGM AMVLDKKSNV ESAIDYYRRA VAAAPDDLSI YSNLLFALLH NANIPASEVF AEHLLYGEAV EKRIGASTPV HYLQNKDPNR VLRIGFVSGD LYSHPVSKFL SPVWNDINPQ HFALYAYSTS HHYDEVTRML EERSAVWRNV ASSSDTELFE LIKQDEIDIL FDLSGHTGDN RLSMFAMKPA PIQISWIGYP GTTGLKAMDY YLVMNHAPYP EVLAHQFTEK LLYVLFDRQF EPVVNGPDVN DLPALKNGYL TFASFNRPTK INDTVLSAWG KILVQLPTSK MIIGALPSQQ SREHIRKRLE SQGVQPDQLI FRERVNIMSY LAMHQEIDVL LDTFPYTGGT TTNYALWMGV PTLTLAGETY AARQGVVNLG QAGLNEFIAD SEADYIDKAI SWNNRLDELN QIRHSLRKKM AHDVGADNVT AATYFEQALR MVWKAYCAGE PPKSYAIGHS PVP
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