| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2568 |
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| Symbol | |
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| ID | 8133516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2934672 |
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| End bp | 2935781 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644865852 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_003018135 |
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| Protein GI | 253688945 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC CAGTGTATGT AACAAGCCCG TTATTACCGC CTTTGGATGA GTTTACTCCT
TATCTTGAAG AAATATGGGA AAATAAGTGG CTAACTAATA ATGGGACATT CCATCAGCGG
TTGGAGCAAG CTCTGGCTGA TTATCTTGGC GTTCCATACC TTAGTTTATT TTCCAATGGC
ACACTGGCTT TATTAACTGC TTTGCAAGCG TTACGTATCA CTGGCGAGGT CATTACTACT
CCTTACTCAT TTGTGGCAAC ATCGCATACA TTACTGTGGA ATGGGTTAAA ACCCGTCTTT
GTTGATATTG ATCCAGTAAC ATGTAATCTT GATCCTTCTA AATTAGAGCA GGCTATTACG
CCAGCAACGT CTGCAATTTT ACCCGTGCAT TGTTATGGAC TACCTGCAGA TGTTGACCGT
ATTCAAAATA TAGCTGATAT ATATGGCCTA AAAGTGATTT ATGACGCGGC TCATGCTTTT
GGTGTTAAGA GGAATGATGT CAGCATATTA AATCATGGCG ATCTTTCGAT TCTCAGTTTT
CATGCGACGA AAGTTTTTAG CACTATCGAA GGTGGTGCGA TTATTTCTCA AGATGAGAAA
ATGAAAAAGA GAATTGATTA TCTTAAGAAT TTTGGCTTCG TTGATGAAGT AACCGTTGTT
GCTCCTGGTA TTAATGCAAA AATGAATGAG GTTCAGGCCG CATTCGGATT GCTTCAATTA
AAATATATTG ATTCAGCATT GGAGCAGCGT AAGAGTATTT ATCTAAGATA TTGTGAGCTT
TTAAAAAACA TTGCGGGAAT TAATGTTGTG AACATTCCTG AGAATGTGAC CTGGAATTAT
GCTTATTTTC CTATTTTCTT CTCTGATGAC TTCCCTAAAA AAAGAGATGA AGTTTACAAT
ATGATGAGAG AAAAAAATAT ATATGCTCGC CGATATTTTT ACCCTCTGAT CAGTACTTTC
CCAATGTATC GAGGGTTGGA CTCAGCTAAA GAAGGTGGCC TGCCAACGGC AACGCACATT
GCTGACAATG TGCTCTGTCT TCCTATTTAT CCTGATTTGT CAGATGAAAG TATATTGGAT
GTTGTTAGGT GTATTTCTGA TTGTGCGTAA
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| Protein sequence | MKKPVYVTSP LLPPLDEFTP YLEEIWENKW LTNNGTFHQR LEQALADYLG VPYLSLFSNG
TLALLTALQA LRITGEVITT PYSFVATSHT LLWNGLKPVF VDIDPVTCNL DPSKLEQAIT
PATSAILPVH CYGLPADVDR IQNIADIYGL KVIYDAAHAF GVKRNDVSIL NHGDLSILSF
HATKVFSTIE GGAIISQDEK MKKRIDYLKN FGFVDEVTVV APGINAKMNE VQAAFGLLQL
KYIDSALEQR KSIYLRYCEL LKNIAGINVV NIPENVTWNY AYFPIFFSDD FPKKRDEVYN
MMREKNIYAR RYFYPLISTF PMYRGLDSAK EGGLPTATHI ADNVLCLPIY PDLSDESILD
VVRCISDCA
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