Gene PC1_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2567 
Symbol 
ID8133515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2933844 
End bp2934545 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content33% 
IMG OID644865851 
ProductWbqC-like family protein 
Protein accessionYP_003018134 
Protein GI253688944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.873018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAAGT ATGCGGTAAT GCAACCTTAT TTCTTTCCTT ACATTGGCTA TTTTCAGTTG 
ATGGCCGAAG TAGATGTTTT TGTGGTTTAC GATAATATAA AATACACCAA AAAAGGATGG 
ATAAATCGAA ACCGCATTTT GTTAAATGGG AAAGATAGTA CGTTTAGTCT ACCATTGAAG 
AAAGACTCTG ATTTTTTAGA TGTTAAAGAT AGGGTACTGT CAGAGACATT TAATAGAGAA 
GACTTAATCA ATAAAATATG TGGCGCTTAT CGTCGCGCTC CTTATTTTAA AGATGTTTTT 
CCATTGCTGG AAAGTATAAT TAATTATCGA GATGATAATT TGTTTAACTA TATATTTTTC 
TCATTGAAAA GCATTAAAGA ATATCTTGGT TTAGCATGTG ATATAAAAAT ATCCTCTTCT 
ATCAATATCG ATCACTCACT AAAATCTCAA GACAAAGTGC TTGCATTTGG GAACGCTCTC 
GGCGCAAAAG CGTACAGTAA CCCACCTGGT GGTATTTCTC TTTATTCCCA AGACGCCTTT 
GCGTCACATG GAATGACTCT GAATTTTATC CAGCCAAATA GTATTATTTA TAAACAATTC 
GATGAACCTT TTGTGGCTTG GTTATCAATC ATTGATGTCA TGATGTTTAA TTCCAGTGAT 
GAGGTACTAC GCCTTATTAC TACTGAATAT GAGTTGATAT AA
 
Protein sequence
MIKYAVMQPY FFPYIGYFQL MAEVDVFVVY DNIKYTKKGW INRNRILLNG KDSTFSLPLK 
KDSDFLDVKD RVLSETFNRE DLINKICGAY RRAPYFKDVF PLLESIINYR DDNLFNYIFF 
SLKSIKEYLG LACDIKISSS INIDHSLKSQ DKVLAFGNAL GAKAYSNPPG GISLYSQDAF 
ASHGMTLNFI QPNSIIYKQF DEPFVAWLSI IDVMMFNSSD EVLRLITTEY ELI