Gene PC1_2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2566 
Symbol 
ID8133514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2932882 
End bp2933841 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content45% 
IMG OID644865850 
Producthypothetical protein 
Protein accessionYP_003018133 
Protein GI253688943 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.466202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCAGT GGAAAAAGTT AGGTAAGGTA TTCACCCCAC AAGAGATTAA TGACCGCCCC 
TGGCTTAAAG AGTTTGCACA GGCACCCGCA ACGCTGGTCT TTGATGATTT TGTCCGTGTT 
TATTTCTCTT GTCGCCCACC TGCTGATGAG CATGGCATGT ATGTTAGCTA TTCTGCCTGG 
GTTGACCTGG ATCGTCATAA TCTTTTCAAT GTATTACGTG TTTCCGAAAC CCCGATTTTA 
CCATTAGGGC AATCGGGTGA ATTTGACGAA TTCGGTACCT ATCCGGTATC CGTTGTTCGT 
GATGAAAATA TTTTCCGTGC ATATTATGCC GGCTGGACTC GGTGTGAGTC TGTACCTTTC 
AACGTTGCCA TCGGCATGGC CACTAGTGAT GATGGTGATG TATTCCGCAA AGCTGGGCCA 
GGACCGATTA TTAGCTATTC TCCTGAAGAA CCCTTTGTTA TGAGCGGGCC GAAAATTCGC 
CGTTTTAATG GCGAATGGCA GTTATTCTAT ATCGCAGGTC GTAGATGGAA ACGGGTTGAT 
GGTAGAGCAG AGCCTGTTTA CAAAATTCGC ATGGCGTTAT CGAGTGATGG CATAAATTGG 
CGGAAGATAA ATAAAGATTT AATCAGCAGC CGAATTGAAG AAGATGAAGC GCAGGCGAGT 
CCCGATGTGT TTTATGCAAA CGGTAAGTAT CATATGTTCT TTTGCTACCG CTACAGTGAA 
CATTATCGAG GCAAAAAGCA TGGGTATCGT ATTGGATATG CATGGAGCTC CGATCTCATT 
GACTGGCATC GTGATGATGA AAAAGCAGGA ATTGATGTGT CTGAAACAGG GTGGGACTCG 
GAAATGATCA GCTATCCCCA TGTGTTTGAA CTTGATGGTA AGGTCTATAT GGCATATTTA 
GGCGATCAAG TTGGGCGCTA TGGTTTTGGT TTGGCACAGT TAGAAGGAGA ATTGCGCTAA
 
Protein sequence
MFQWKKLGKV FTPQEINDRP WLKEFAQAPA TLVFDDFVRV YFSCRPPADE HGMYVSYSAW 
VDLDRHNLFN VLRVSETPIL PLGQSGEFDE FGTYPVSVVR DENIFRAYYA GWTRCESVPF 
NVAIGMATSD DGDVFRKAGP GPIISYSPEE PFVMSGPKIR RFNGEWQLFY IAGRRWKRVD 
GRAEPVYKIR MALSSDGINW RKINKDLISS RIEEDEAQAS PDVFYANGKY HMFFCYRYSE 
HYRGKKHGYR IGYAWSSDLI DWHRDDEKAG IDVSETGWDS EMISYPHVFE LDGKVYMAYL 
GDQVGRYGFG LAQLEGELR