| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2561 |
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| Symbol | fliA |
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| ID | 8133509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2928196 |
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| End bp | 2928918 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865845 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_003018128 |
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| Protein GI | 253688938 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGCGATT TGTATACCGC CGAAGGCACA ATGGATAAAA ATTCCCTTTG GAAGCGCTAT
GTTCCACTAG TGCGCCATGA AGCCTTGCGT TTACAGGTTC GTCTCCCCGC GAGTGTTGAG
CTTGACGATC TGCTACAGGC TGGTGGTATC GGTTTGCTCA GTGCAGTCGA GCGTTATGAT
TCGTTGCAAG GTACGGCGTT TACTACCTAT GCCGTTCAAC GAATCCGCGG TTCGATGCTG
GATGAATTAC GCAGTCGTGA TTGGGCTCCA CGCAGTGTAC GGCGTAATGC GCGGGAAGTG
GCACAAGCAA TGCAGCAGGC TGAACAACAG CTCGGTCGTA CTCCAACAGA GCAGGAGGTT
GCGCAGGCCC TGAATATCAC ACTTGAGGAT TATCGTCAGA TATTGCTGGA TACGAACAAC
AGCCAGCTTT TTTCTTACGA TGAATGGCGT GAGGAACATG GTGATAGCGC AGAGGCTCTA
CTGGAAGGCA ATGAAGATGC GAATCCATTG CATCAATTGA TGGAAGGCAA TTTGCGCCAT
CGTGTGATGG ACGCGATTGA AAGCCTGCCA GAGCGTGAGA AATTGGTATT GACGCTTTAC
TATCAGGAAG AGTTGAACCT GAAAGAAATC GGTGCCGTTC TCGAAGTCGG GGAGTCGAGA
GTCAGTCAGT TGCATAGCCA GGCGATAAAG CGCCTGCGCG TGAAATTAAT GAACGATGTT
TAA
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| Protein sequence | MSDLYTAEGT MDKNSLWKRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLSAVERYD
SLQGTAFTTY AVQRIRGSML DELRSRDWAP RSVRRNAREV AQAMQQAEQQ LGRTPTEQEV
AQALNITLED YRQILLDTNN SQLFSYDEWR EEHGDSAEAL LEGNEDANPL HQLMEGNLRH
RVMDAIESLP EREKLVLTLY YQEELNLKEI GAVLEVGESR VSQLHSQAIK RLRVKLMNDV
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