Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2556 |
Symbol | |
ID | 8133503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2921932 |
End bp | 2922519 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865839 |
Product | transcriptional regulator BetI |
Protein accession | YP_003018123 |
Protein GI | 253688933 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | [TIGR03384] transcriptional repressor BetI |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.160785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTAAAG TCGGAATGCA GCCCATCAGA CGGCAGCAGC TCATCGAAGC GACACTGGCC GCGATTAACG ATGTGGGGAT GCATGATGCC TCGATCGTAC AGATTGCCCG ACGTGCGGGT GTGTCGAATG GGATCATCAG CCATTACTTC CGCGATAAAA ATGGCTTACT GGAAGCGACG ATGCGCTACC TGATAAGTCA TCTGGGGCTG GCGGTGAAAT CAAGGCTACT GAGCCTGACA GAAAACACGC CTCGTGCACG TTTACGGGCG ATTGTTCAGG GAAATTTTGA TGATAGCCAG ACGAATAGCG CGGCGATGAA AACCTGGCTG GCGTTTTGGG CCAGTAGCCT GCATTCCCCC ATGCTCCATC GGCTACAGCA GGTTAACGAT CGGCGGCTTT ACTCCAACCT GTGCATCGAG TTTAGCCATT GCTTGCCGAA AGATAACGCG CGTATTGCGG CAAAAGGGCT AGCGGGACTG ATCGATGGGC TGTGGCTGCG CAGTGCGCTA AGTCATGACG CCTTCAACCG CGAAGAAGCA TTGAGCATTG CCTACGACTA TATCGAGCAG CAGCTCACTC GCACGTAA
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Protein sequence | MPKVGMQPIR RQQLIEATLA AINDVGMHDA SIVQIARRAG VSNGIISHYF RDKNGLLEAT MRYLISHLGL AVKSRLLSLT ENTPRARLRA IVQGNFDDSQ TNSAAMKTWL AFWASSLHSP MLHRLQQVND RRLYSNLCIE FSHCLPKDNA RIAAKGLAGL IDGLWLRSAL SHDAFNREEA LSIAYDYIEQ QLTRT
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