| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2546 |
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| Symbol | |
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| ID | 8133493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2909658 |
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| End bp | 2911793 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865829 |
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| Product | hypothetical protein |
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| Protein accession | YP_003018113 |
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| Protein GI | 253688923 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00487152 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTCACCT TTGCCCCAGG AATTCGCCGC TATGTGTACA ACAGCAGTTG GCTGTACACC
ATTCGTATCC TCATTGCGCT CAGCGGTGCG GCGGCAGTTC CCTGGTGGCT AGGTCAACCA
ACATCAACCA TTCCGGTCAC GCTTGGCGTC GTTGCGGCCG CCCTCACTGA CCTTGACGAT
CGCCTCACCG GACGTCTGCG TAATCTGTTC ATTACGCTGG CCTGTTTTTT TGTCGCTTCC
GTCTCGATCG AACTGCTTTT TCCCTATCCC TGGCTATTCG GGTTTGGTCT GGCTATATCG
ACCTGCGGCT TTATTCTGCT CGGCGCATTA GGGCAGCGCT ATGCGACTAT CGCCTTCGGC
GCACTGCTGA TTGCGATTTA CACCATGCTG GGAATCTCTC TTTACGACAA CTGGTATCAG
CAGCCCATTA TGCTGCTGAT CGGGGCATCG TGGTACAACC TGCTTACGCT GTTCGGCCAT
CTGATATTCC CCATCCGCCC GTTACAGGAC AACCTCGCAC AGTGTTATCA GCAGTTGGCC
CGCTATCTGG ATGCAAAAGC CAATCTATTC GATCCCGATA TTGAAGAAGA AACCGACAAA
CCCTTGATTG ACGTCGCGAT GGCAAACAGC CAGTTGGTCG CGATTCTCAA CCAGACCAAA
TCCTCGCTGT TAACGCGTCT GCGTGGCGAT CGCGGGCAGC GCGGGACGCG TCAAACGCTG
CACTACTATT TTGTCGCTCA GGATATTCAC GAACGGGCCA GTTCATCACA CGTTTACTAT
CCACAACTAC GCGAGAAACT GCGCTATAGC GACGTCTTAT TTCGCTTTCA ACGCCTGCTC
AGCATGCAGG CCAAAGCCTG TCAGCAACTA TCGCAATCCA TTCTGCTACA GCAAAAATAT
CAGCATGACA GCCGCCTTGA ACGGGCTTTC GTGCATCTCG AGTCCGCGAT TACGCGTATC
GCAGCCAACA ACATGGCAGA TGCTGCACAA CTTAAGGCGC TCACATATTT ATTAAATAAT
CTGCGCGCCA TTGACGCCCA GTTGGCGACT ATCGAATCCG AACAGGCCAT CGAGCAAGAA
AATAACCCGG AAAACACGCT GGCAGACGAC AAAATAACGG GTTGGAGCGA CATCCGCTTG
CGTATTAGTC GCCACCTGAC GCCCCAGTCG GCGCTGTTTC GTCATGCTAT CCGCATGTCC
GTACTCCTCT GTAGCGGTTA CGCGTTGATT CAGATAACGG GTTTGCAACA CGGTTACTGG
ATCCTGCTGA CCAGCCTGTT TGTTTGCCAG CCAAACTATA ACGCCACCCG GCGACGGCTG
ACGTTGAGGA TTATTGGCAC ATTGACCGGT ATTTTACTCG GCTTGCCCAT TTTGTATTTC
GTCCCATCGC TGGAAGGGCA GCTCACGCTC ATCGTCATTA GTGGCGTACT GTTCTTCGCC
TTTCGCAACG TGCAGTACGC GCACGCAACC ATGTTTATTA CGCTGCTTGT CCTGCTCTGT
TTCAATCTAT TGGGCGAGGG CTTTGAAGTC GCGGTGCCAC GTATTATCGA TACCTTGTTG
GGGTGCGCCA TCGCGTGGGC TGCGGTGAGC TTTATCTGGC CGGACTGGCG TTTTCGCGGT
CTGCCCACCG TTATCAATAA GACTCTGGAC GCCAACTGCC GTTATCTTGA TGCGATTATG
GTGCAATATC ATCAGGGGAA AGATAATAGC CTGCCTTATC GGATTGCCCG CCGAGATGCG
CATAACTGTG ATGCAGAGCT GGCATCTGTC GTGTCGAATA TGTCTTCAGA GCCTCACGCG
ACCAGAAATA AGCTGGACAG TGCATTTCGC TTCATGTGCC TGAATCATAC GTTGTTAAGC
TATATATCAA CGCTCGGCGC GCACCGTGGG AAAATTACCT CATCGGAAAC GCTGCAATTG
CTGGATGATG CCGTGTGTCA TGTTGATGAC GCGCTACACT GCAGCGAAGA GGAAAGCTCA
CGCATCAATC AGGGATTGAA AACTATTACC GCCAGCATTC AATCCCTTTC GCCTGAGTCA
GACAGTAAAG AATCATTGAT TATTCAGCAA ATCGGTCTGC TGCTCGGCCT TCTGCCTGAA
CTCGTACAGC TAAAAAATGA CATGATGAGA CAGTGA
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| Protein sequence | MLTFAPGIRR YVYNSSWLYT IRILIALSGA AAVPWWLGQP TSTIPVTLGV VAAALTDLDD
RLTGRLRNLF ITLACFFVAS VSIELLFPYP WLFGFGLAIS TCGFILLGAL GQRYATIAFG
ALLIAIYTML GISLYDNWYQ QPIMLLIGAS WYNLLTLFGH LIFPIRPLQD NLAQCYQQLA
RYLDAKANLF DPDIEEETDK PLIDVAMANS QLVAILNQTK SSLLTRLRGD RGQRGTRQTL
HYYFVAQDIH ERASSSHVYY PQLREKLRYS DVLFRFQRLL SMQAKACQQL SQSILLQQKY
QHDSRLERAF VHLESAITRI AANNMADAAQ LKALTYLLNN LRAIDAQLAT IESEQAIEQE
NNPENTLADD KITGWSDIRL RISRHLTPQS ALFRHAIRMS VLLCSGYALI QITGLQHGYW
ILLTSLFVCQ PNYNATRRRL TLRIIGTLTG ILLGLPILYF VPSLEGQLTL IVISGVLFFA
FRNVQYAHAT MFITLLVLLC FNLLGEGFEV AVPRIIDTLL GCAIAWAAVS FIWPDWRFRG
LPTVINKTLD ANCRYLDAIM VQYHQGKDNS LPYRIARRDA HNCDAELASV VSNMSSEPHA
TRNKLDSAFR FMCLNHTLLS YISTLGAHRG KITSSETLQL LDDAVCHVDD ALHCSEEESS
RINQGLKTIT ASIQSLSPES DSKESLIIQQ IGLLLGLLPE LVQLKNDMMR Q
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