Gene PC1_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2545 
Symbol 
ID8133492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2909191 
End bp2909637 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content50% 
IMG OID644865828 
Producthypothetical protein 
Protein accessionYP_003018112 
Protein GI253688922 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0262048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTACTG TGTTGAATAT CCTTAATTTC GTATTAGGTG GTTTTTTCAC CACACTGGCC 
TGGCTTCTGG CGACTGTCGT CAGCGTGCTA CTGATTTTTA CCTTACCGCT AACACGCTCA
TGTTGGGAAA TCACCAAGCT GTCGCTCTTC CCTTATGGCA ATGAAGCCAT CCATGTTGAT
GAACTACGCC CAGATGAAAA GAGCACGATT CTCAATGCAG GCGGTTCTCT GCTGAATATC
TTCTGGTTCA TTTTCTTTGG CTGGTGGCTC TGCCTGTCGC ACATCATTAC CGGTATCGCG
CAGTGCATTA CCATCATCGG CATTCCTGTT GGCATCGCTA ACTTTAAAAT TGCTGCCATC
GCGCTGTGGC CAGTAGGGCG TCGCGTGGTT TCCGTCGAAC TTGCACAGGC TGCGCGGGAA
AACAATGCCC GCCGCCACTT TCGCTAA
 
Protein sequence
MRTVLNILNF VLGGFFTTLA WLLATVVSVL LIFTLPLTRS CWEITKLSLF PYGNEAIHVD 
ELRPDEKSTI LNAGGSLLNI FWFIFFGWWL CLSHIITGIA QCITIIGIPV GIANFKIAAI
ALWPVGRRVV SVELAQAARE NNARRHFR