Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2545 |
Symbol | |
ID | 8133492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2909191 |
End bp | 2909637 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644865828 |
Product | hypothetical protein |
Protein accession | YP_003018112 |
Protein GI | 253688922 |
COG category | [S] Function unknown |
COG ID | [COG3304] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0262048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACTG TGTTGAATAT CCTTAATTTC GTATTAGGTG GTTTTTTCAC CACACTGGCC TGGCTTCTGG CGACTGTCGT CAGCGTGCTA CTGATTTTTA CCTTACCGCT AACACGCTCA TGTTGGGAAA TCACCAAGCT GTCGCTCTTC CCTTATGGCA ATGAAGCCAT CCATGTTGAT GAACTACGCC CAGATGAAAA GAGCACGATT CTCAATGCAG GCGGTTCTCT GCTGAATATC TTCTGGTTCA TTTTCTTTGG CTGGTGGCTC TGCCTGTCGC ACATCATTAC CGGTATCGCG CAGTGCATTA CCATCATCGG CATTCCTGTT GGCATCGCTA ACTTTAAAAT TGCTGCCATC GCGCTGTGGC CAGTAGGGCG TCGCGTGGTT TCCGTCGAAC TTGCACAGGC TGCGCGGGAA AACAATGCCC GCCGCCACTT TCGCTAA
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Protein sequence | MRTVLNILNF VLGGFFTTLA WLLATVVSVL LIFTLPLTRS CWEITKLSLF PYGNEAIHVD ELRPDEKSTI LNAGGSLLNI FWFIFFGWWL CLSHIITGIA QCITIIGIPV GIANFKIAAI ALWPVGRRVV SVELAQAARE NNARRHFR
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