Gene PC1_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2540 
Symbol 
ID8133487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2904717 
End bp2905025 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content50% 
IMG OID644865823 
Productheat shock protein HspQ 
Protein accessionYP_003018107 
Protein GI253688917 
COG category[S] Function unknown 
COG ID[COG3785] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02097] hemimethylated DNA binding domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0223653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCT GTAAATTTGG CATCGGACAA CAGATTCGTC ATAAGCTACT GGGGTTTCCG 
GGGGTCGTTA TCGATATCGA TCCCGAATAC TCATTAGAAA CACCCACTTG GGAAGAGATT
AGCGGCAACG ATACGCCACG TTCCGAACCG TGGTATCACG TTGTGATGGA AGATGACGAA
GGCCAACCTA TACATACTTA TCTGGCAGAA GCGCAGTTGA TGAAGGAAGA ACTGTCGGAA
CACGAACACC CTTCACTCAA CGAGCTAGCC GAGGTCATTC AGCGCCGTGC GCCACAGCTG
CGCCATTAA
 
Protein sequence
MIICKFGIGQ QIRHKLLGFP GVVIDIDPEY SLETPTWEEI SGNDTPRSEP WYHVVMEDDE 
GQPIHTYLAE AQLMKEELSE HEHPSLNELA EVIQRRAPQL RH