Gene PC1_2525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2525 
Symbol 
ID8133471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2893671 
End bp2895194 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content56% 
IMG OID644865807 
ProductPepSY-associated TM helix domain protein 
Protein accessionYP_003018092 
Protein GI253688902 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACACC CTAATCAGGC ATCAGCCACT GCTGCCGCCT CCGGCACGCG CTCAGCCGGA 
GAAACCGCGC CGGTTCAACA CGCGGTAGAC AACGTATCGC CACGTGCCGC GATCGTCGCT
CTCTTCATCC GTCTGCATTT CTATATTGGT ATTTTTGTCG GCCCTTTTAT TTTCGTCGCA
GCCCTGACGG GTACGCTGTA TGTCCTGACG CCGCAGATTG AAAATCGACT GTATTCACAC
CAGCTTTTCA CCCAAAGTCA GGGCACTCCG CATCCACTGG CTGATCAAAT TCGTGCCGCA
CAGGCGGGGC TTGTTCACCA TCAGGATGCA AAATTACTGG CAATACGTCC TGCGCCTGCT
GCCGGAGAAA CCACGCGCGT TATGTTTGCT TTGCCGGAAC TGGGGCCATC AGAAAGTCGC
GCCGTTTTCA TCGACCCTGT CTCGCTGGAA AATCGCGGTA GTGAGATTGT TTACGGCACC
AGCGGCATTC TGCCATTCCG TACCTGGCTT GATTACCTGC ACCGCGGGCT GCTGCTAGGT
GATATCGGGC GTAATTACAG CGAGCTGGCG GCATCCTGGC TGTGGGTCGC GGCACTGGGC
GGCATTGTCA TCTGGTGGTC AACCCGACAT GTCTCGTCAG CGGCCAAACG ACGGAAATTG
AAAAATAGCC AGACGACGGC GGCAAAGACG CAGCGACTGC GCCACTGGCA TGCCACGATG
GGGCTAAGCC TTGTGCTTGG TTTGCTCTTT TTCTCCGCGA CGGGGTTAAC CTGGTCACAG
TGGGCAGGCA GCAACATTTC TGTCGCGCGT ACCACATTAG GATGGCAGAC CCCATCAGTC
AAAACCCAAT TGCCCGCACC GATGTCCCAT CACGACATGA TGCACGGTCA CGACATGGCG
ATGGCTACGG ATGAGCACGC GGAACATCAT GCGTCAATGC CAATGGGGGA TGTCGACGCC
TCTTCACCCA CGTTATTTGA TGAGGTACTG GCTGCCGCAC GTCATGCAGG GATTGATGCC
AATAAAATCG AAATCCGCCC CGCCACTCAG CCGCACCGCG CCTGGACAGT CAGTGAGATC
GACCGTGCCT GGCCAACGCA GGTTGATGCC GTATCGATTA ACCCTGATAC GCTGGATGTT
GTGGACAAAA CCGATTTCAA CACCTTCCCG CTGGCCGCCA AGCTCACGCG TTGGGGCGTA
GATGCACACA TGGGCGTGCT ATTCGGTTTG CCAAATCAGC TCATCCTCGC GGCATTTGGA
CTTGGGCTCT GTGCAATGAT CGTCTGGGGC TATCGGATGT GGTGGATACG TCGTCCAAAA
TCTCGTCATA GCGTGAATCC GGTCAACACG CTGACGGCAG CATGGTTAGC GGTTCCCGTC
TTTCAGCGTG TGCTTATTGC GCTTATCACG CTGCTACTGG CAGTCAGTTT ACCCGTCATG
GGGATCAGCC TGCTCATCTT CCTGCTGATT GATACAGTTC GGTGGTATAT GGGCAACCCC
AAGCAGGCTA TCGCCAAAAG CTGA
 
Protein sequence
MSHPNQASAT AAASGTRSAG ETAPVQHAVD NVSPRAAIVA LFIRLHFYIG IFVGPFIFVA 
ALTGTLYVLT PQIENRLYSH QLFTQSQGTP HPLADQIRAA QAGLVHHQDA KLLAIRPAPA
AGETTRVMFA LPELGPSESR AVFIDPVSLE NRGSEIVYGT SGILPFRTWL DYLHRGLLLG
DIGRNYSELA ASWLWVAALG GIVIWWSTRH VSSAAKRRKL KNSQTTAAKT QRLRHWHATM
GLSLVLGLLF FSATGLTWSQ WAGSNISVAR TTLGWQTPSV KTQLPAPMSH HDMMHGHDMA
MATDEHAEHH ASMPMGDVDA SSPTLFDEVL AAARHAGIDA NKIEIRPATQ PHRAWTVSEI
DRAWPTQVDA VSINPDTLDV VDKTDFNTFP LAAKLTRWGV DAHMGVLFGL PNQLILAAFG
LGLCAMIVWG YRMWWIRRPK SRHSVNPVNT LTAAWLAVPV FQRVLIALIT LLLAVSLPVM
GISLLIFLLI DTVRWYMGNP KQAIAKS