| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2521 |
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| Symbol | |
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| ID | 8133467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2887569 |
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| End bp | 2888489 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865803 |
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| Product | lipid A biosynthesis lauroyl acyltransferase |
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| Protein accession | YP_003018088 |
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| Protein GI | 253688898 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.197793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACAAA TCCCTTCTTT TAATCGTTCA TTGCTACATC CGCGCTACTG GCTCACCTGG
TTGGGCATCG GCATCCTTTA CCTTATCGTT TTGCTTCCCT ATCCCGTTCT GTATCGTATC
GGTACCGCAC TTGGTCATCT GGCTATGCGT CTATTGCCAA AGCGCGTCAA CGTTGCCACC
CGTAACCTTG AACTGTGTTT CCCCGAGATG TCGCAGGCTG AACGTGATGA ATTAGTCAGG
AAGAATTTTG AATCTGTCGG CATGGGGGTG ATTGAAACCG GTATGGCCTG GTTTTGGCCA
GACTGGCGTA TCGAGCGCTG GTTTACGGTG ACGGGCGTTG AGCACATTCG TCCTGAGAAC
GAACGGGATC AAGGAGTACT GCTCATCGGA CTGCATTTTT TAACATTGGA GCTCGGCGCA
CGAGTTTTTG GCATGCACAA TCCGGGGATC GGTGTCTATC GTCCGAATGA TAACAAGCTG
ATTGATTGGT TACAGACCTG GGGAAGAATG CGGTCCAATA AATCCATGTT GGACCGAAAA
GATCTTAAGG GCATGATTCG TGCTCTCAAA CAGGGCGATA TTATCTGGTA TGCCCCAGAT
CACGACTATG GTCCACGAAG CAGCGTATTC GCCCCTCTGT TTGCCGTAGA AAAAGCGGCG
ACAACCCGTG GCAGCTATAT GCTGATCAAG ACCGCGCGCC CTGCCGTCAT TCCTTTTGTT
CCACGCCGTC TGCCTGACGG AAAAGGCTAT GAACTGCTGA TCCAACCTGC AGAGCAGGAT
GCACCTGTAG ATAATGAAAC CGAGACAGCC GTTTGGATGA ATAAGGTTGT TGAAAAGAAT
ATTCTGCTCG CACGGGATCA ATATATGTGG CTGCACCGTC GTTTCAAAAC CCGCCCGGAA
GGCGAACCGT CCTTTTATTA A
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| Protein sequence | MTQIPSFNRS LLHPRYWLTW LGIGILYLIV LLPYPVLYRI GTALGHLAMR LLPKRVNVAT
RNLELCFPEM SQAERDELVR KNFESVGMGV IETGMAWFWP DWRIERWFTV TGVEHIRPEN
ERDQGVLLIG LHFLTLELGA RVFGMHNPGI GVYRPNDNKL IDWLQTWGRM RSNKSMLDRK
DLKGMIRALK QGDIIWYAPD HDYGPRSSVF APLFAVEKAA TTRGSYMLIK TARPAVIPFV
PRRLPDGKGY ELLIQPAEQD APVDNETETA VWMNKVVEKN ILLARDQYMW LHRRFKTRPE
GEPSFY
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