Gene PC1_2520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2520 
Symbol 
ID8133466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2886216 
End bp2887310 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content55% 
IMG OID644865802 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003018087 
Protein GI253688897 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.984471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGC TTTTCTCCCC CGTATCTCTT GGTAAACTCG AACTACCTAA CCGAATCATC 
ATTGCCCCTA TGTGCCAGTA TTCGGCTGAG GACGGCAAAG CGACGGCCTG GCATACCATG 
CATTTAGGTA ACCTGTCACA TTCCGGAGCA GGATTACTCA TTATCGAAGC TACCGCGGTT 
TCTCCAGAAG GCCGAATTTC CCCACGCGAC CTTGGCTTGT GGGATGACGC TACCGAACAG 
GCCCTTGCTG GCGCGGTTAA CGCGGTCAAA ACCTATTCTG CCATGCCTCT CGGCATACAA 
TTGGGTCACG CAGGTCGCAA AGCCTCAACG GGGGTTCCTT GGAGCGGGCG AGCATTTCTG 
CGTCCGGAGC AGGGAGGCTG GCAGACTATT GCACCATCAG CGATCCCCTA TAATGACAGC 
GATGCTGCGC CGCTGGCGAT GTCAGAACAA CACATCCGCG CGTTAATTGA TTCATTCGTT 
TCGTCTGCTA AACGTGCGGA TCGTCTGGGC TTTGACCTGA TAGAAATTCA TGCTGCTCAC 
GGCTATTTGC TGCATCAGTT CCTTTCACCG CTGACAAATC AGCGCACAGA TAACTACGGG 
GGGTCACTTC AGAACCGGAT ACGCCTCGTC GTCGAGATTT ACCGTGCAGT ACGCGATGTT 
TTTCCGGCGC ACAAAGCCGT TGGTGTGCGC ATTTCTGCGA CAGATGGCGT TGAGGGCGGT 
TGGGATCTGG AGCAGTCGGT ACAGCTTAGT CAAGCGTTGC ACGAATTAGG CTGCGATTTC 
ATCCACGTAT CCAGTGGCGG ACTATCGCCG TTGCAACAAA TCCATCCGGC ACCCAATTAT 
CAGGTGCCGT ATGCGCAGCG GATTAAGCAA GAGGTAGGCA TCACCACCAT CGCTGTTGGG 
CTAATAACCG AGCCGGAACA GGCAGAAGCG ATCGTCGCAA CCGGTGAGGC AGACGCTATT 
GGACTGGCTC GCGCCATTCT CTTCGATCCC CGTTGGCCAT GGCATGCGGC CGTAAGACTG 
GGCGCGCAGG TATCCGCCCC GGCACAGTAC TGGCGTAGTG AACCACGCTA TGCCAGAGGC 
ATTTTCAAAC AGTAG
 
Protein sequence
MSQLFSPVSL GKLELPNRII IAPMCQYSAE DGKATAWHTM HLGNLSHSGA GLLIIEATAV 
SPEGRISPRD LGLWDDATEQ ALAGAVNAVK TYSAMPLGIQ LGHAGRKAST GVPWSGRAFL 
RPEQGGWQTI APSAIPYNDS DAAPLAMSEQ HIRALIDSFV SSAKRADRLG FDLIEIHAAH 
GYLLHQFLSP LTNQRTDNYG GSLQNRIRLV VEIYRAVRDV FPAHKAVGVR ISATDGVEGG 
WDLEQSVQLS QALHELGCDF IHVSSGGLSP LQQIHPAPNY QVPYAQRIKQ EVGITTIAVG 
LITEPEQAEA IVATGEADAI GLARAILFDP RWPWHAAVRL GAQVSAPAQY WRSEPRYARG 
IFKQ