| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2510 |
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| Symbol | |
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| ID | 8133456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2875589 |
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| End bp | 2876545 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865792 |
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| Product | 23S rRNA pseudouridylate synthase C |
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| Protein accession | YP_003018077 |
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| Protein GI | 253688887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000592786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG ATAATCCTTC AGTACAATTT GTGACGATCT CCGCAGATGA AGCGGGGCAG
CGCGTCGATA ACTTTTTGCA TACCCACTTA AAGGGTGTGC CTAAAAGCAT GGTTTACCGT
ATCTTGCGTA AAGGCGAGGT AAGGATAAAT AAGAAACGGG TCAAGCCTGA GTATAAATTG
CTCGACGGTG ATGTCATTCG TATTCCGCCT GTTCGGCAGG CAGAACGTGA TGAAACGCCT
GTTTCTGCGA GTCTTGGTAA AGTCGCGGCG TTGGCCGAGT GCATTATTTA CGAAGATGAC
TACCTGCTGG TGCTGAATAA GCCTTCGGGT ACCGCTGTGC ATGGCGGGAG CGGTCTGAGC
TTCGGCGTAA TTGAAGGCCT GCGTGCTTTA CGCCCGGAAG CGCGTTTTCT GGAGCTAGTA
CACCGCCTCG ATCGCGATAC GTCAGGCGTT TTGCTGGTAG CGAAAAAACG TTCGGCTTTG
CGTTCTCTGC ATGAACAGCT GCGGCTGAAA GGCATGCAAA AAGATTATCT GGCGTTGGTT
CGCGGACAAT GGCAATCCCA TTGCAAGGTT GTTCAGGCAC CGTTGCTAAA AAATATTCTA
CAAAGCGGTG AGCGCGTTGT GCGGGTTAAC AGCGAAGGTA AGCCGTCGGA AACGCGCTTT
AAGGTAGAAG AGCGTTTTGA GCATGCAACT CTGGTAAGGG CGAGTCCTGT CACCGGACGT
ACGCATCAAA TTCGTGTACA CACTCAATAT GCTGGGCATC CGATAGCATT TGATGACCGT
TACGGCGATC GCGAGTTCGA TGAGCAACTG GCGGACACCG GTTTAAAACG TCTGTTCCTG
CATGCGCAGG CACTGCGTTT TGAGCATCCG AATACTGGCG AGACGTTGAG AATCGAAGCG
CCTTTGGATA ATGGTCTACG TCGCTGTCTT CAGGCGTTGC GTAAGACAAA AGCATAA
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| Protein sequence | MKTDNPSVQF VTISADEAGQ RVDNFLHTHL KGVPKSMVYR ILRKGEVRIN KKRVKPEYKL
LDGDVIRIPP VRQAERDETP VSASLGKVAA LAECIIYEDD YLLVLNKPSG TAVHGGSGLS
FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLRLK GMQKDYLALV
RGQWQSHCKV VQAPLLKNIL QSGERVVRVN SEGKPSETRF KVEERFEHAT LVRASPVTGR
THQIRVHTQY AGHPIAFDDR YGDREFDEQL ADTGLKRLFL HAQALRFEHP NTGETLRIEA
PLDNGLRRCL QALRKTKA
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