| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2504 |
|---|
| Symbol | |
|---|
| ID | 8133450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2871107 |
|---|
| End bp | 2872036 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644865786 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_003018071 |
|---|
| Protein GI | 253688881 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000592786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAT TTGCAATGGT GTTTCCCGGT CAGGGATCGC AGACGGTAGG GATGTTGGCC
GAGCTTGCGG CAGAATACCC AATTGTCACC GAGACGTTTG CTCAGGCATC TGAAGCGTTA
GGTTATGACT TATGGCAACT CACCCAACAA GGGCCTGCTG AAGAGTTGAA TAAAACCTGG
CAGACGCAGC CTGCGTTACT GACCGCTTCT GTTGCTATCT GGCGTGTCTG GCAGCAGCAG
GGCGGAAAAA CGCCAGCGCT GATGTCTGGC CATAGCCTGG GTGAATATTC CGCACTGGTT
TGTGCTGGTG TTCTCGATTT TCAACAGGCT GTCCGTTTAG TTGAACTGCG CGGCAAACTG
ATGCAGGAAG CGGTACCGGA AGGAACGGGC GCGATGTCTG CGATTATCGG GCTTGATAAC
GATGCCATTG CCAAAGCGTG TGAAGAATCC GCGCAGGGAC AAGTGGTCTC TCCGGTAAAC
TTCAATTCAC CGGGTCAGGT GGTGATTGCG GGCAATAAAG ACGCCGTTGA GCGTGCCGGT
GCAGCGTGTA AAGCAGCTGG CGCGAAGCGT GCACTGCCGC TGCCTGTCAG TGTGCCGTCA
CACTGTGCGT TAATGGAACC AGCGGCGAAG AAACTTGCTG TTGCGCTGGA ATCCGTGACC
TTTAATTCTC CGGTCATTCC CGTTGTCAAT AATGTTGATG CGAGCATCGA AACGACGCCG
GAAGCGATTC GCGATGCGTT GGTACGCCAG CTTTATCGCC CCGTGCGCTG GACTGACTGT
GTTGAATTTA TGGCCTCTCA GGGCGTTGAG TCACTGTTAG AAGTCGGGCC GGGTAAAGTA
TTGACTGGCT TAACCAAACG AATCGTCGAT ACCCTGACAG CAGCTGCGGT GAACGATCCT
GCTTCTCTAT CAGCGGCGAT TGAGAAATAA
|
|---|
| Protein sequence | MTQFAMVFPG QGSQTVGMLA ELAAEYPIVT ETFAQASEAL GYDLWQLTQQ GPAEELNKTW
QTQPALLTAS VAIWRVWQQQ GGKTPALMSG HSLGEYSALV CAGVLDFQQA VRLVELRGKL
MQEAVPEGTG AMSAIIGLDN DAIAKACEES AQGQVVSPVN FNSPGQVVIA GNKDAVERAG
AACKAAGAKR ALPLPVSVPS HCALMEPAAK KLAVALESVT FNSPVIPVVN NVDASIETTP
EAIRDALVRQ LYRPVRWTDC VEFMASQGVE SLLEVGPGKV LTGLTKRIVD TLTAAAVNDP
ASLSAAIEK
|
|---|
| |