| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2500 |
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| Symbol | |
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| ID | 8133446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2867718 |
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| End bp | 2868515 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865782 |
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| Product | 4-amino-4-deoxychorismate lyase |
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| Protein accession | YP_003018067 |
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| Protein GI | 253688877 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00140105 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGTGGA TTAATGGCCA GTTACAGGAA CAGCTCTCGG TGCTCGATCG GGCGACACAG
TATGGTGACG GCTGCTTTAC GACAGCCAGA GTCAGTGCTG GAGAGGTTGT CTGGTTTGAT
CGACATATCG CGCGCCTGCA ACAGGCCGCG ACACGCCTGT TATTCCCACT TGTTGACTGG
GAAGGCCTGA TTGCGGAAAT GAAACTGGCA GCACAGGGAC GGGCGGACGG CGTAGTAAAA
GTGATGCTAA CGCGCGGCGC TGGCGGGCGT GGCTATAGTC CCCAAGGCTG CATGCAGCCA
ACCCGGATCG TCATGCAGAC AGGCTATCCT GCGCACTATG CCGATTGGCG CGAACAAGGG
ATTAGCCTGA ATCTTAGCCC GGTGGCGCTA TCTAAAAATC CACTGTTGGC GGGCATAAAA
CATCTGAATC GTCTTGAGCA GGTGCTGATT CGCGCGCATC TTGACCAGAC ATCAGCCGAT
GAGACCCTCG TGCTTGACAC TTCCGGTGCG CTAGTGGAAT GCTGTGCCGC TAATTTATTC
TGGCGCAAAG GAAATCATGT CTATACGCCG GATGTATCTC AGTCTGGTGT AGATGGCGTT
GCCCGGCAGC ATATTATTGC CTCGCTGGCA GGTTCTGACT TCGATCTACA GATCGTCAGT
GAACCTGTGG CTGCATTGGC CGATGCGGAT GAGGTGCTGG TTTGTAATGC ATTAATGCCG
ATAGTCCCCG TGAATCAGGC GCATGTCTGG CGTTACCACT CCCGAGAGCT TTATCGATTC
CTGAGTTCTG ACTGCTAG
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| Protein sequence | MLWINGQLQE QLSVLDRATQ YGDGCFTTAR VSAGEVVWFD RHIARLQQAA TRLLFPLVDW
EGLIAEMKLA AQGRADGVVK VMLTRGAGGR GYSPQGCMQP TRIVMQTGYP AHYADWREQG
ISLNLSPVAL SKNPLLAGIK HLNRLEQVLI RAHLDQTSAD ETLVLDTSGA LVECCAANLF
WRKGNHVYTP DVSQSGVDGV ARQHIIASLA GSDFDLQIVS EPVAALADAD EVLVCNALMP
IVPVNQAHVW RYHSRELYRF LSSDC
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