| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2496 |
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| Symbol | |
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| ID | 8133442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2864208 |
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| End bp | 2865005 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865778 |
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| Product | putative metallodependent hydrolase |
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| Protein accession | YP_003018063 |
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| Protein GI | 253688873 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00642491 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGTTAG TGGATTCCCA CTGTCACCTT GACGGTCTGG ATTATCAGTC ATTGCATAAA
GATGTCTCCG ATGTTCTGGA GAAAGCGAAA CGTCGCGATG TCGGCTTCCT GTTGGCCGTG
GCAACTACGC TGCCCGGTTA TCGTGCCATG GTAGAGTTAA TCGGCGAGCG CGATAATGTG
GCGTTTTCCT GCGGCGTTCA TCCGCTTAAT CAGGAAGCCC CTTATGATTA TGCCGAGCTG
CGCGAGCTAG CCAGCGCCAG TCGCGTGGTG GCGATGGGGG AAACGGGGCT GGACTATTTC
TACCAGCAGG AGACGAAAAC CCAACAGCAA GAATCGTTTC GCGAACATAT TCGTATTGGC
AATGATTTGA ACAAACCGGT CATTGTGCAT ACGCGTGCCG CCCGTGAAGA TACGCTGGCT
ATTCTGCGTG ACGAACACGC GGAGAAATGC AGCGGCGTGC TGCACTGTTT TACGGAAGAT
TTGGCAACGG CAAAGTCTCT GCTGGATATG GGGTTTTATA TCTCGTTTTC TGGCATCGTG
ACGTTCCGTA ATGCCGAGGA ATTGCGTGAT GTCGCGCGTT ACGTGCCGCT GGATCGGATG
CTGATTGAGA CGGATTCCCC TTGGTTAGCA CCAGTTCCAT TCCGTGGCCA GGAAAACCAA
CCTGCGTATG TACGTGATGT TGCGGAATAT CTTGCCGTAG TGAAAGGCAC ATCGCTGGAA
ACCCTCGCTG CCGCCACGAC AGAAAACTTC TCCCGCCTGT TTCACATCGA TCCGACTCGG
TTGACCGCTG CGCAATAG
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| Protein sequence | MLLVDSHCHL DGLDYQSLHK DVSDVLEKAK RRDVGFLLAV ATTLPGYRAM VELIGERDNV
AFSCGVHPLN QEAPYDYAEL RELASASRVV AMGETGLDYF YQQETKTQQQ ESFREHIRIG
NDLNKPVIVH TRAAREDTLA ILRDEHAEKC SGVLHCFTED LATAKSLLDM GFYISFSGIV
TFRNAEELRD VARYVPLDRM LIETDSPWLA PVPFRGQENQ PAYVRDVAEY LAVVKGTSLE
TLAAATTENF SRLFHIDPTR LTAAQ
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