Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2482 |
Symbol | |
ID | 8133428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2849949 |
End bp | 2850539 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644865764 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003018049 |
Protein GI | 253688859 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCGTC GTACCCGTGC TGAAATGGAA GAAACCCGTG CTACGCTGCT GGCGACCGCC CGTAAGGTCT TCAGCGAACG CGGTTATGCG GATACCTCAA TGGACGATCT TACCGCGCAG GCGAGCCTGA CCCGTGGGGC GCTTTATCAC CACTTTGGTG ATAAAAAGGG GTTGCTCGCG GCAGTGGTGG AACAGATCGA TGCCGAGATG GATGAACGAC TGCAAGTCAT CTCCGACACT GCCGAGGATG CCTGGGACGG CTTTCGCCGT CGTTGCCGTG CCTATCTGGA AATGGCGCTG GAACCGGAGA TTCAGCGGAT TGTGCTGCGC GATGCCCGTG CCGTGTTGGG TGGTGCCTCA CCGGATTCAC AGCGCCATTG CGTTGAGTCG ATGCAGCGGC TGATCGATAA CCTTATCCGG CAAGGTGTAG TGGCTGAAGC CGATCCACAG GCGCTGGCAT TCTTAATCTA CGGCAGTCTG GCCGAAGCGG CATTCTGGAT TGCGGACGGA GAGGATGGTA ATGCGCGGCT GGCACAAGGC GTTGCCGCGC TGGAGTTGCT GCTACGGGGG CTGTTAGTCA AGCCACGCTA G
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Protein sequence | MVRRTRAEME ETRATLLATA RKVFSERGYA DTSMDDLTAQ ASLTRGALYH HFGDKKGLLA AVVEQIDAEM DERLQVISDT AEDAWDGFRR RCRAYLEMAL EPEIQRIVLR DARAVLGGAS PDSQRHCVES MQRLIDNLIR QGVVAEADPQ ALAFLIYGSL AEAAFWIADG EDGNARLAQG VAALELLLRG LLVKPR
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