Gene PC1_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2482 
Symbol 
ID8133428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2849949 
End bp2850539 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content59% 
IMG OID644865764 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003018049 
Protein GI253688859 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGTC GTACCCGTGC TGAAATGGAA GAAACCCGTG CTACGCTGCT GGCGACCGCC 
CGTAAGGTCT TCAGCGAACG CGGTTATGCG GATACCTCAA TGGACGATCT TACCGCGCAG 
GCGAGCCTGA CCCGTGGGGC GCTTTATCAC CACTTTGGTG ATAAAAAGGG GTTGCTCGCG 
GCAGTGGTGG AACAGATCGA TGCCGAGATG GATGAACGAC TGCAAGTCAT CTCCGACACT 
GCCGAGGATG CCTGGGACGG CTTTCGCCGT CGTTGCCGTG CCTATCTGGA AATGGCGCTG 
GAACCGGAGA TTCAGCGGAT TGTGCTGCGC GATGCCCGTG CCGTGTTGGG TGGTGCCTCA 
CCGGATTCAC AGCGCCATTG CGTTGAGTCG ATGCAGCGGC TGATCGATAA CCTTATCCGG 
CAAGGTGTAG TGGCTGAAGC CGATCCACAG GCGCTGGCAT TCTTAATCTA CGGCAGTCTG 
GCCGAAGCGG CATTCTGGAT TGCGGACGGA GAGGATGGTA ATGCGCGGCT GGCACAAGGC 
GTTGCCGCGC TGGAGTTGCT GCTACGGGGG CTGTTAGTCA AGCCACGCTA G
 
Protein sequence
MVRRTRAEME ETRATLLATA RKVFSERGYA DTSMDDLTAQ ASLTRGALYH HFGDKKGLLA 
AVVEQIDAEM DERLQVISDT AEDAWDGFRR RCRAYLEMAL EPEIQRIVLR DARAVLGGAS 
PDSQRHCVES MQRLIDNLIR QGVVAEADPQ ALAFLIYGSL AEAAFWIADG EDGNARLAQG 
VAALELLLRG LLVKPR