| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2470 |
|---|
| Symbol | |
|---|
| ID | 8133416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2834931 |
|---|
| End bp | 2835695 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644865752 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003018037 |
|---|
| Protein GI | 253688847 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.225805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC ATGAAGCAGG ACATAAATTT TTAGCCCGGT TGGGGAAAAA ACGTCTGCGC
CCCGGCGGCA GAAAGGCGAC CGAGTGGCTG CTCAGTCAGG CTGGGTTTCG ACAGGACAGT
GTTGTGCTGG AAGTTGCCTG CAATATGGGC ACTACGGCGA TGGAGATCGC CCGTCGTTTT
GGCTGTCAGG TCATCGGTGC GGATATGGAT AAAGCCGCGC TAGAGAAGGC GCAGGAAAAT
GTTGCGGCGA ACGGTCTGGC TTCGCAGGTC ACGATTATGC AGGCGAATGC GCTGGAACTG
CCGTTTCCCG ATAATCACTT TGACGTGGTG ATTAACGAAG CCATGCTGAC GATGTATGCC
GACAAGGCCA AGAGCCGGAT TATTGCTGAA TATTATCGCG TGCTGAAACC GGGTGGCCGC
CTGATTACTC ACGATATTAT GCTGCTCTCC GAGAAAGATA CCGGGGCATT GCAGGCGGTG
GAACAGATGC ACAAAGCGAT CAACGTACAT GCTCAGCCGA TGCTGCGTGA GCGCTGGGTG
ACGCTGTTTC AGGAGTGTGG TTTTAGCAAG GTTAGCTACG ATAACGGTGC AATGACGCTG
CTGACGCCAC AAGGGCTGAT TTATGATGAA GGTTTGGCTG GCGCGGCGCG CATCGTAAAA
AATGCACTGA AGAAAGAAAA CCGTGGCATG TTCTTCAACA TGTTTCATAC CTTCCGCCGC
AATCGCAACC AGCTTAACTA TATTGCGGTA TGCAGCACGA AGTAG
|
|---|
| Protein sequence | MSDHEAGHKF LARLGKKRLR PGGRKATEWL LSQAGFRQDS VVLEVACNMG TTAMEIARRF
GCQVIGADMD KAALEKAQEN VAANGLASQV TIMQANALEL PFPDNHFDVV INEAMLTMYA
DKAKSRIIAE YYRVLKPGGR LITHDIMLLS EKDTGALQAV EQMHKAINVH AQPMLRERWV
TLFQECGFSK VSYDNGAMTL LTPQGLIYDE GLAGAARIVK NALKKENRGM FFNMFHTFRR
NRNQLNYIAV CSTK
|
|---|
| |