| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2465 |
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| Symbol | lplA |
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| ID | 8133411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2830654 |
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| End bp | 2831670 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865747 |
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| Product | lipoate-protein ligase A |
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| Protein accession | YP_003018032 |
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| Protein GI | 253688842 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0095] Lipoate-protein ligase A |
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| TIGRFAM ID | [TIGR00545] lipoyltransferase and lipoate-protein ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.249663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCTCTC TGCGTTTATT GATCTCTGAC TCTTACGATC CCTGGTTTAA TCTGGCCGTT
GAGGAATGCA TCTTTCGCCA GATGCCCACT ACGCAGCGGG TGTTGTTTTT GTGGCGTAAT
GCGGAAACTG TGGTCATTGG TCGTGCCCAA AACCCGTGGA AAGAGTGCAA TACGCGGCGG
ATGGAAGAGG ATGGCATCAA GCTGGCACGA CGCAGCAGCG GCGGCGGGGC GGTTTTTCAC
GATCTCGGGA ATACCTGTTT TACCTTTATG GCGGGCAAAC CGGAGTACGA TAAAAGCGTC
TCAACGCAGA TCGTTCTGGA TGCACTCAGT GCTCTTGGGT TAAAAGCGAG CGCGTCAGGT
CGCAACGATC TGGTGGTGGA AACCGCAGAC GGTGTGCGCA AAGTGTCCGG TTCCGCCTAT
CGCGAAACGA AAGATCGCGG CTTTCATCAC GGCACGCTAC TGCTAAACGC AGACCTCAAT
CGTTTAGCTG ATTACTTAAA CCCAGACATT AAAAAACTAC AGGCAAAAGG GATTACGTCT
GTGCGTTCTC GCGTTGCCAA TCTGGTGGAG TTGCTGCCTT CTGTCGATCA TCAGGTGATC
TGTCAGGCGG TGACGCAGGC CTTCTTCGAT TATTTCGGCG AACAGTGCGA GCCGGAAATT
ATCTCGCCTT CTGCTTACCC CGATTTACCG GGGTTCAGCG AACAGTTTGC ACGTCAAAGT
AGCTGGGAAT GGAATTTCGG TCAGGCGCCG GACTTCTCGC ATTTACTTGA TAACCGATTT
ACCTGGGGCG GGATTGAATT GCATTTCGAT GTGGAACGCG GCGTGATTAT CCGCGCGCAG
GTTTATACCG ATAGCCTGAA CCCTGCGCCG TTAGAAGCAC TCGCTTGCGC ATTACAGGGA
ACGGCATATC GTCCGGAAAA TATGGCGGCA ACGTGTCAGG CATTGATTAC CGCTTTCCCT
GAACAGCAAA ACGAATTGCA GGAACTGGCT GAGTGGCTGG AGCAGAGTTT GCGTTAA
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| Protein sequence | MSSLRLLISD SYDPWFNLAV EECIFRQMPT TQRVLFLWRN AETVVIGRAQ NPWKECNTRR
MEEDGIKLAR RSSGGGAVFH DLGNTCFTFM AGKPEYDKSV STQIVLDALS ALGLKASASG
RNDLVVETAD GVRKVSGSAY RETKDRGFHH GTLLLNADLN RLADYLNPDI KKLQAKGITS
VRSRVANLVE LLPSVDHQVI CQAVTQAFFD YFGEQCEPEI ISPSAYPDLP GFSEQFARQS
SWEWNFGQAP DFSHLLDNRF TWGGIELHFD VERGVIIRAQ VYTDSLNPAP LEALACALQG
TAYRPENMAA TCQALITAFP EQQNELQELA EWLEQSLR
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