Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2460 |
Symbol | |
ID | 8133406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2825524 |
End bp | 2826342 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865742 |
Product | periplasmic binding protein |
Protein accession | YP_003018027 |
Protein GI | 253688837 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACT GGCTATTCCC CCTGCTATTG ACACTCCCGC TGGGGGTGTC TGCTGCCGAA CGTATCGTGT CTATCGGCGG TGACGTCACG GAAATCATTT ATGCGCTGGG CGCAGAGAAA GATCTGGTTG CACGAGACAG CACCAGCCTG CACCCGGAAG CGGTGAAGAA GCTGCCTGAT GTCGGCTATA TGCGCCAGCT CAACACCGAA GGCATTCTGG CAATGAAACC GTCTCTGGTT GTCGCCAGCG ATCTGTCTCA GCCGTCTCTC ATTCTGCAGC AGGTTGCCAG CAGCGGTACC AAAGTCGTTC ACGTTCCTGC TCAGCCTTCG TTGGATGTTG TGCCGCAAAA AATCGGCGTC ATCGCACAGG CGCTGGGGAA AGAGACGGAA GGTAAAAAGC TGGCGGAAAC CTATCAACAG CAACTGGCGG CAGTAAAAAA CTCTCCGCTG CCGGTGAATG TGCTGTTCGT TCTCAGCCAC GGCGGCATGA CCGCGCTGGC GGCAGGCAAA AATACCCCGG CGGACACGAT TATCCGCAGC GCGGGATTAA AGAATGCCAT GCAAAACGTT GAGCGTTACC AGCCGCTGTC GCAAGAAGGC GTGGTTGCCA GTGCGCCAGA CCTGATTCTG ATCTCCAGTC AGGGGCTGAA AACATTGGGT GGTGAAGCGC AAGTCTGGAA ATTACCCGGT CTGGAATTGA CGCCTGCTGG CAAGCAGAAA CGCCTGCTCG TCGTCGATGA CATGGCAATG CTCGGCTTTA CGCTCGACAC CCCAGCGCTA ATGGCAACGC TGCGCCAGAC AGCCGAAGCG ATAAAATGA
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Protein sequence | MKNWLFPLLL TLPLGVSAAE RIVSIGGDVT EIIYALGAEK DLVARDSTSL HPEAVKKLPD VGYMRQLNTE GILAMKPSLV VASDLSQPSL ILQQVASSGT KVVHVPAQPS LDVVPQKIGV IAQALGKETE GKKLAETYQQ QLAAVKNSPL PVNVLFVLSH GGMTALAAGK NTPADTIIRS AGLKNAMQNV ERYQPLSQEG VVASAPDLIL ISSQGLKTLG GEAQVWKLPG LELTPAGKQK RLLVVDDMAM LGFTLDTPAL MATLRQTAEA IK
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