Gene PC1_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2460 
Symbol 
ID8133406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2825524 
End bp2826342 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content56% 
IMG OID644865742 
Productperiplasmic binding protein 
Protein accessionYP_003018027 
Protein GI253688837 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4558] ABC-type hemin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT GGCTATTCCC CCTGCTATTG ACACTCCCGC TGGGGGTGTC TGCTGCCGAA 
CGTATCGTGT CTATCGGCGG TGACGTCACG GAAATCATTT ATGCGCTGGG CGCAGAGAAA
GATCTGGTTG CACGAGACAG CACCAGCCTG CACCCGGAAG CGGTGAAGAA GCTGCCTGAT
GTCGGCTATA TGCGCCAGCT CAACACCGAA GGCATTCTGG CAATGAAACC GTCTCTGGTT
GTCGCCAGCG ATCTGTCTCA GCCGTCTCTC ATTCTGCAGC AGGTTGCCAG CAGCGGTACC
AAAGTCGTTC ACGTTCCTGC TCAGCCTTCG TTGGATGTTG TGCCGCAAAA AATCGGCGTC
ATCGCACAGG CGCTGGGGAA AGAGACGGAA GGTAAAAAGC TGGCGGAAAC CTATCAACAG
CAACTGGCGG CAGTAAAAAA CTCTCCGCTG CCGGTGAATG TGCTGTTCGT TCTCAGCCAC
GGCGGCATGA CCGCGCTGGC GGCAGGCAAA AATACCCCGG CGGACACGAT TATCCGCAGC
GCGGGATTAA AGAATGCCAT GCAAAACGTT GAGCGTTACC AGCCGCTGTC GCAAGAAGGC
GTGGTTGCCA GTGCGCCAGA CCTGATTCTG ATCTCCAGTC AGGGGCTGAA AACATTGGGT
GGTGAAGCGC AAGTCTGGAA ATTACCCGGT CTGGAATTGA CGCCTGCTGG CAAGCAGAAA
CGCCTGCTCG TCGTCGATGA CATGGCAATG CTCGGCTTTA CGCTCGACAC CCCAGCGCTA
ATGGCAACGC TGCGCCAGAC AGCCGAAGCG ATAAAATGA
 
Protein sequence
MKNWLFPLLL TLPLGVSAAE RIVSIGGDVT EIIYALGAEK DLVARDSTSL HPEAVKKLPD 
VGYMRQLNTE GILAMKPSLV VASDLSQPSL ILQQVASSGT KVVHVPAQPS LDVVPQKIGV
IAQALGKETE GKKLAETYQQ QLAAVKNSPL PVNVLFVLSH GGMTALAAGK NTPADTIIRS
AGLKNAMQNV ERYQPLSQEG VVASAPDLIL ISSQGLKTLG GEAQVWKLPG LELTPAGKQK
RLLVVDDMAM LGFTLDTPAL MATLRQTAEA IK