| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2455 |
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| Symbol | |
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| ID | 8133401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2818297 |
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| End bp | 2819343 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865737 |
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| Product | thiamine biosynthesis lipoprotein ApbE |
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| Protein accession | YP_003018022 |
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| Protein GI | 253688832 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.489519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCTC TCGCCGCGAA GAGATTACTA CTCTGTGGCT TATTCAGTCT TCTGACCGCC
TGCGATAATC CAGCACCAAC GGCACAGCGC CCCTTGTTGA CCATTGAAGG TAAAACGATG
GGGACGTTTT ACAGCGTAAA AATTAGCGGC GACATCACCG AAGACAAAAC GCAGTTGCAA
CGAGAAATCG ATGCCCTGCT GGATCAGGCC AATAACGACA TTTCCACCTA CCGTGACGAT
TCCGTGCTGT CGCGTTTTAA TCAGTATCGG GGAACGGATC CACAACCTAT CAGCAACGGC
ATGGCGGATA TTATTCTGGC TGCGCTGCGT ATCGGTAAAG CCACTCACGG CGCGATGGAT
ATCACCGTCG GCCCGCTGGT TAACCTCTGG GGGTTCGGCC CGCAAAAACA GCCTACGCGT
ATTCCCAGCC AGCAGCAGAT CGATGTCGCA CGGCAAAACG TTGGGTTGCG TCACCTGAAA
CTGATCGGCG ACGAAAAAGG AGAATGGATT CAGAAAGATC TCCCGGATTT GTATGTCGAT
CTCTCCACGC TGGGCGAAGG GTATGGCGCA GATGTTCTCG CACAGTTAAT GACGCGCAAA
GGGATCACCA ATTATCTGGT TTCCGTCGGC GGCGCCATTT CCAGCCGTGG CGTAAATGCA
GAAGGAACGC CGTGGCGCGT GGCGATTCAG AAGCCAACCG ACCAGGAAAA CGCGGCACAG
GCAGCGGTGA ATTTGCAGGG CTATGCAATC AGCACCTCCG GCAGCTATCG GAATTATTTT
GAGCAGGACA ACAAACGTTA TTCTCACGTT ATCGATCCCG AGACGGGCAG ACCGATTACT
CACCAGTTGG TTTCTGCGAC CGTAATTGCG CCGACTGCGC TGGAAGCGGA TGGTTGGGAT
ACGGGGTTAA TGGTGTTGGG CACGGAGAAA GCGTTGAAGC TGGCAGAACA GCAAGGGCTA
GCGGTTTATC TGATTACCAA AACGGATAAG GGTTTTAGCG CGGTAATGAC GCCGCAGTTT
AAATCCTTCC TGATTGCGGC ACCGTAA
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| Protein sequence | MTPLAAKRLL LCGLFSLLTA CDNPAPTAQR PLLTIEGKTM GTFYSVKISG DITEDKTQLQ
REIDALLDQA NNDISTYRDD SVLSRFNQYR GTDPQPISNG MADIILAALR IGKATHGAMD
ITVGPLVNLW GFGPQKQPTR IPSQQQIDVA RQNVGLRHLK LIGDEKGEWI QKDLPDLYVD
LSTLGEGYGA DVLAQLMTRK GITNYLVSVG GAISSRGVNA EGTPWRVAIQ KPTDQENAAQ
AAVNLQGYAI STSGSYRNYF EQDNKRYSHV IDPETGRPIT HQLVSATVIA PTALEADGWD
TGLMVLGTEK ALKLAEQQGL AVYLITKTDK GFSAVMTPQF KSFLIAAP
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