| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2453 |
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| Symbol | |
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| ID | 8133399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2813222 |
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| End bp | 2816275 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865735 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_003018020 |
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| Protein GI | 253688830 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.999389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCAC AGATCACGCA ATCTCCCGGG CTGGTTCAGC CGGTGCTTAA TTTTTTGGAA
GCATTGAAGA AAAATGGATT CACGGGCGAT ACGGCGACCA ATTATGCCGA TCGTCTGACA
ATGGCAACGG ATAACAGTAT CTATCAACTT TTGCCGGATG CGGTGGTTTT CCCCCGTTCA
ACCGCTGATG TCGCGATCTT ATCTCGCCTG GCGGGGGAAA CACGTTTTTC AGAGCTGACC
TTTACTCCAC GCGGCGGCGG TACGGGAACG AACGGGCAGG CGCTGAATCG CGGCATCGTG
GTCGATATGT CGCGTTATAT GAACCGCATT CTGGAAATTA ATCCTGAACA GGGGTGGGTG
CGTGTCGAAG CGGGCGTCAT TAAAGATCAG CTTAACCAAT ACCTGAAGCC TTATGGCTAT
TTCTTTGCAC CTGAGCTGTC AACCAGTAAC CGGGCGACGC TGGGCGGCAT GATCAACACC
GATGCCTCGG GGCAAGGTTC GCTGGTGTAC GGCAAAACCT CAGACCATGT GCTGGGGCTG
CGTGCGGTAC TGTTAGGCGG CGAAATGCTG GATACGCAGG CGATGCCAGT GGAGCTGGCT
GAGAAACTGG CGTTAGAAGA TTCACCTATC GGTCGTATTT ACCATACGGT GCTGCACCGC
TGTCGCGAAC AGCGTGCATT GATTATCGAC AAGTTCCCCA AGCTGAATCG TTTTCTGACT
GGTTACGACC TGCGCCATGT GTTCAGCGAC GATCTCCGTA CTTTTGACCT GACGCGTATT
CTGACAGGCG CTGAAGGCAC GCTGGCGTTT ATCACCGAAG CGAAACTCGA TATCACGCCT
TTGCCAAAGA TTCGCCGTCT GGTGAATATC AAATATGACT CCTTTAATTC AGCGCTGCGC
AATGCGCCGT TCATGGTAGA GGCGAAGGCG CTGTCGGTTG AAACCGTGGA CTCTAAGGTA
TTAAACCTTG CCCGCGAGGA TATCGTCTGG CACTCCGTTA GCGAGCTGAT TACCGATGTG
CCTAATCAGG AAATGCTCGG CCTGAATATC GTTGAGTTCG CGGGTGATGA TGACACGCTG
ATTAACGGAC AGGTCGACGC GCTCTGTCAG GGGCTGGATA CGCTGCTGGC GAGCGGAGAA
GGCGGGGTGA TTGGCTATCA AACCTGTAAC GACCTGGCCG GAATCGAACG TATTTATGCC
ATGCGGAAAA AAGCCGTAGG GCTGCTGGGC AACAGCAAAG GGCAGGCGAA GCCGATTCCG
TTCGCGGAAG ATACCTGCGT GCCGCCACAG CATCTGGCGG ATTATATCGA AGAATTCCGT
GCGCTGTTGG ACAGCCATAA TTTGACGTAC GGGATGTTCG GCCACGTGGA CGCTGGCGTG
CTGCACGTTC GCCCAGCGCT GGATATGTGC GACCCGCAAC AGGAAATGCT GATGAAACAG
CTTTCCGACC AGATTGTCGC GCTGACGGCT AAATATGGCG GTCTGCTGTG GGGGGAACAC
GGCAAAGGCT TCCGCGCTGA ATACAGTCCT GAATTCTTTG GGCCAGAGCT GTATGCCGAA
CTGCGCCGCA TCAAGGCGGC GTTCGACCCT GATAATCGCC TGAATCCCGG TAAAATTTGT
GCGCCGTTGG ATGTCGATGC GCCGATGATG AAAGTCGATG CGGTCAAGCG TGGCACGTTC
GATCGCACGA TCCCGCTGAC GGTGCGCACA GCGTTCCGTG GCGCGATGGA GTGTAACGGT
AACGGGCTGT GCTTTAACTT TGATGCCCGT AGCCCAATGT GCCCGTCGAT GAAAATCAGC
GGCAACCGCA TTCATTCACC GAAAGGCCGT GCCACGCTGG TGCGCGAATG GTTACGCTTG
CTGGCGGAGC AGGGCGTCGA TCCGGTGGCG CTGGAGAAGG CATTGCCGCA GCAGAAGCTG
AGCCTGCGCG CATTTATCCA GAAAACGCGC AATACCTGGC AGGCGAAGCA GGGGGATTAC
GATTTCTCCC ATGAAGTTAA AGACGCGATG TCGGGCTGTC TGGCGTGTAA AGCCTGTTCA
ACGCAGTGCC CTATCAAGAT CGATGTGCCT GGTTTCCGTT CCCGCTTCCT ACAGCTTTAC
CACACGCGCT ATCTGCGTCC GGTTCGTGAT TATCTGGTTG CCGGTGTCGA AAGCTATGCG
CCGCTGATGG CACGTAGCCC GAAGACGTTT AACTTCTTCC TGAAAATGCC GCTGCTGAAT
AACCTGAGCC GCAGCCAGAT CGGCATGGTT GATTTACCCT TGCTGTCATC GCCGTCGTTG
CGCCAGCAGT TTGCCGGGCA TAGCGGCGTC AACACCACGC TGGAACAACT GGAGCAGTTG
CCGGAAGCGG CGCGCCAGCA ATACGTGCTA ATCGTGCAGG ATCCGTTTAC CAGCTATTAC
GATGCGCAGG TGGTGGCAGA TTTCGTCCAT CTGATTGAAA AGCTGAAGCT GAAACCGGTG
CTGCTGCCGT TCTCGCCAAA CGGAAAGGCA CAGCACATTA AAGGCTTCCT GCAGCGTTTT
GCTAAAACGG CCTCGAAGAC GGCAGATTTC CTGAACCGTG TCGCGAAACT GGGGATGCCG
ATGGTGGGCG TCGATCCGGC GTTGGTGCTG TGCTATCGCG ACGAATACCG TGAAATTCTG
GGTGAGAAAC GTGGTGATTT TCAGGTGCAA CTGGTGCATG AATGGCTGGT GACGGCACTG
GCCGACAGCA CGCCGCAGCC TGCCACTGGC GAATCCTGGT ATCTGCTGGG GCACTGTACG
GAAACCACGG CGTTGCCGAT TAGCACGAAA CAGTGGGCCG ATATCTTCTC GCGTTTTGGT
GCCAAACTGG AGAATATCAG CGTCGGATGC TGCGGCATGG CGGGAACCTA CGGCCATGAA
ACCAAAAACC TCGCCAACTC GCAGGGCATT TATGCGCTAT CCTGGCAACA GGTGTTGCAG
AAGTTACCTC AGAAACGCTG CCTGACCACG GGCTATTCAT GCCGCAGTCA GGTGAAACGC
ATGGAAGGCA GCGCATTGCG CCATCCGCTA CAGGCCTTGC TGGAGATTAT CTGA
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| Protein sequence | MIPQITQSPG LVQPVLNFLE ALKKNGFTGD TATNYADRLT MATDNSIYQL LPDAVVFPRS
TADVAILSRL AGETRFSELT FTPRGGGTGT NGQALNRGIV VDMSRYMNRI LEINPEQGWV
RVEAGVIKDQ LNQYLKPYGY FFAPELSTSN RATLGGMINT DASGQGSLVY GKTSDHVLGL
RAVLLGGEML DTQAMPVELA EKLALEDSPI GRIYHTVLHR CREQRALIID KFPKLNRFLT
GYDLRHVFSD DLRTFDLTRI LTGAEGTLAF ITEAKLDITP LPKIRRLVNI KYDSFNSALR
NAPFMVEAKA LSVETVDSKV LNLAREDIVW HSVSELITDV PNQEMLGLNI VEFAGDDDTL
INGQVDALCQ GLDTLLASGE GGVIGYQTCN DLAGIERIYA MRKKAVGLLG NSKGQAKPIP
FAEDTCVPPQ HLADYIEEFR ALLDSHNLTY GMFGHVDAGV LHVRPALDMC DPQQEMLMKQ
LSDQIVALTA KYGGLLWGEH GKGFRAEYSP EFFGPELYAE LRRIKAAFDP DNRLNPGKIC
APLDVDAPMM KVDAVKRGTF DRTIPLTVRT AFRGAMECNG NGLCFNFDAR SPMCPSMKIS
GNRIHSPKGR ATLVREWLRL LAEQGVDPVA LEKALPQQKL SLRAFIQKTR NTWQAKQGDY
DFSHEVKDAM SGCLACKACS TQCPIKIDVP GFRSRFLQLY HTRYLRPVRD YLVAGVESYA
PLMARSPKTF NFFLKMPLLN NLSRSQIGMV DLPLLSSPSL RQQFAGHSGV NTTLEQLEQL
PEAARQQYVL IVQDPFTSYY DAQVVADFVH LIEKLKLKPV LLPFSPNGKA QHIKGFLQRF
AKTASKTADF LNRVAKLGMP MVGVDPALVL CYRDEYREIL GEKRGDFQVQ LVHEWLVTAL
ADSTPQPATG ESWYLLGHCT ETTALPISTK QWADIFSRFG AKLENISVGC CGMAGTYGHE
TKNLANSQGI YALSWQQVLQ KLPQKRCLTT GYSCRSQVKR MEGSALRHPL QALLEII
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