| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2452 |
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| Symbol | |
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| ID | 8133398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2812806 |
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| End bp | 2813222 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865734 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_003018019 |
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| Protein GI | 253688829 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.139649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTATGGA AACGACAGGT TACGCTTGAG CAACTGAATC AACAAAGCCA GACGTGCATG
GTTGGCCATG TCGGTATTCA TTATACCCAT ATCGCGGATG ATTCTCTGGA GGCGGTGATG
CCAGTGGATG CTCGCACACG CCAGCCGTTT GGCTTATTGC ATGGCGGCGC GTCCGTTGTG
CTGGCGGAAT CGCTAGGTTC CGTCGCGGGC TATCTGTGTT CTGAGGGCGA TCAGCAAGTG
GTGGGCCTTG AAATCAATGC TAACCATCTG CGAGCCGTGC GTGAAGGTGA AGTGCGGGGC
GTGTGTCGTG CGCTTCACGT TGGCCGCCGT AGCCAGGTGT GGCAGATTGA GATTTTTGAT
AATCAAAATC GCCTGTGCTG CATTTCACGT CTGACAACAT CCGTTATTAC GCCGTAA
|
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| Protein sequence | MLWKRQVTLE QLNQQSQTCM VGHVGIHYTH IADDSLEAVM PVDARTRQPF GLLHGGASVV
LAESLGSVAG YLCSEGDQQV VGLEINANHL RAVREGEVRG VCRALHVGRR SQVWQIEIFD
NQNRLCCISR LTTSVITP
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