| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2444 |
|---|
| Symbol | |
|---|
| ID | 8133390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2804764 |
|---|
| End bp | 2805786 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644865726 |
|---|
| Product | ErfK/YbiS/YcfS/YnhG family protein |
|---|
| Protein accession | YP_003018011 |
|---|
| Protein GI | 253688821 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0013268 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCG CGTTAACTTT ACTTGGTATG GCTTTCGCGG CATACCTGAC CAGCACCGCC
GCTAAAGCGA CGGAATACCC GCTACCGCCA CCAAATAGCC GCCTCATCGG CGAGAATATC
GCTTATACGG TCCCCAATGA TGGTCGTCCG CTGGAAGCTA TCGCGGCGGA TTTCAAGATT
GGTTTATTGG GCATGATGGA AGCGAATCCA GGCGTGGATC CTTACCTGCC GAAAGCGGGT
TCCACGCTCA CCATTCCAAC GCAAATGCTG CTGCCGGATA CCCCGCGTGA AGGTATTGTG
GTCAATCTGG CGGAGTTGCG CCTCTACTAC TACCCGAAAG GGAAGAATAC CGTCATTGTG
TACCCGATCG GCATTGGTCA GTTGGGGCGC AATACGCCAC TGATGACGAC CAGCGTGAGT
GAGAAGCGTG AGAACCCGAC CTGGACGCCA ACGGCAAACA TCCGCAAGCA TTATCTTGAA
GAGCAGGGCA TTAAGCTGCC AGCTGTCGTT CCGGCTGGGC CGGATAACCC AATGGGATTG
CATGCGCTGC GTCTGTCCGC GCACGGCGGC GTTTATCTGC TGCACGGTAC GAACGCGGAC
TTCGGCATCG GTATGCGCGT AAGCTCCGGC TGTATCCGTC TGCGTCCGGA TGACATTAAG
GCGTTGTTCG ACAACGTGCC GGTTGGTACG CGAGTTCAGA TTCTTAACGA TGCAATTAAA
ACCTCCGTTG AACCGGACGG CAAACGTTAC GTTGAAGTGC ATCAGCCTCT GTCGAAGACC
GATAAAGACG ATCCACAAAC CATGCCGATT CCACTGACGG CGAAGACGCA GAAGTTTGTT
AAAGATGCGG AGACGGACAG TAAAGCGGTT GCTGATGCGA TTGTGCGCCG TTCAGGTATG
CCGATCGTGG TGAGCGTAGG GCAAGATATC AATACCTACC AGCCACCGGT AGAATCAGCG
CCAGAAGCGC CTGAGACGCA TCAGGCTGCG CCGATCACGG CTATCAGTAC TACCTCGCGT
TAA
|
|---|
| Protein sequence | MKRALTLLGM AFAAYLTSTA AKATEYPLPP PNSRLIGENI AYTVPNDGRP LEAIAADFKI
GLLGMMEANP GVDPYLPKAG STLTIPTQML LPDTPREGIV VNLAELRLYY YPKGKNTVIV
YPIGIGQLGR NTPLMTTSVS EKRENPTWTP TANIRKHYLE EQGIKLPAVV PAGPDNPMGL
HALRLSAHGG VYLLHGTNAD FGIGMRVSSG CIRLRPDDIK ALFDNVPVGT RVQILNDAIK
TSVEPDGKRY VEVHQPLSKT DKDDPQTMPI PLTAKTQKFV KDAETDSKAV ADAIVRRSGM
PIVVSVGQDI NTYQPPVESA PEAPETHQAA PITAISTTSR
|
|---|
| |