Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2440 |
Symbol | |
ID | 8133386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2801112 |
End bp | 2801975 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644865722 |
Product | transcriptional antiterminator, BglG |
Protein accession | YP_003018007 |
Protein GI | 253688817 |
COG category | [K] Transcription |
COG ID | [COG3711] Transcriptional antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000609251 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTG CCAAAATACT CAACAATAAT GTCGTTACCG TAATCGACGA AAACAATAAT GAGTCGGTTG TGATGGGACG CGGGCTGGGC TTCAAAAAGC ACTCTGGCGA TCTGCTGGAC GAAACGCTGA TTGAGCGCGT GTTTGTGATG AAATCCGGGG AACTGACGTC ACGTCTACAG GAGTTGTTGT CAGAGATTCC GATGGATGTC ATCACGACAG CAGACAAGAT CATCCTGTTG GCAAAGGATC GGCTGCCTGG GAAACTGCAA AACAGCGTCT ATATCTCTTT AACGGATCAC TGCCACTTTG CGATAGAGCG CCACAAACAG GGCGTGGATA TCCGCAATGT TCTGCTATGG GAAATAAAGC GCCTGTATCC AAAAGAATTC GCTGTCGGTC TGGAAGCGCT GGATATTATT GAGCAGCGTT TGGCCGTGCG ATTACCGGAA GATGAAGCCG GGTTTATTGC TTTGCATTTG GTGAACGCGC AGCTCGACAG TGAAATGCCG GAAGTACTGC AAATTACTAA AATCATGCAG GAAATACTGA ATATTGTAAA ATATCAGCTT AACCTGGATT ATAACGAACA AGCGCTAAGT TATCATCGCT TTGTGACACA TTTGAAGTTT TTTGCGCAGC GGTTAATAGG AAAAAGTACG GTCTTTAGTG ATGATGAGTC ATTACATGAT GTGGTGAAAG AACGGTATCA ACTGTCTTAT CGCTGTGCGG AAAAAATACA GGCACACATT ATTCAAAAGT ATCACTACAC GTTAACGAAA GAAGAGTTGA TGTTCTTAAC GATTCATATT GAACGCGTGC GAACAGAAGG TCAGGATAAA ATAGAACCAG GTGATGGGGA GTAA
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Protein sequence | MKIAKILNNN VVTVIDENNN ESVVMGRGLG FKKHSGDLLD ETLIERVFVM KSGELTSRLQ ELLSEIPMDV ITTADKIILL AKDRLPGKLQ NSVYISLTDH CHFAIERHKQ GVDIRNVLLW EIKRLYPKEF AVGLEALDII EQRLAVRLPE DEAGFIALHL VNAQLDSEMP EVLQITKIMQ EILNIVKYQL NLDYNEQALS YHRFVTHLKF FAQRLIGKST VFSDDESLHD VVKERYQLSY RCAEKIQAHI IQKYHYTLTK EELMFLTIHI ERVRTEGQDK IEPGDGE
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