Gene PC1_2440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2440 
Symbol 
ID8133386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2801112 
End bp2801975 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content44% 
IMG OID644865722 
Producttranscriptional antiterminator, BglG 
Protein accessionYP_003018007 
Protein GI253688817 
COG category[K] Transcription 
COG ID[COG3711] Transcriptional antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000609251 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG CCAAAATACT CAACAATAAT GTCGTTACCG TAATCGACGA AAACAATAAT 
GAGTCGGTTG TGATGGGACG CGGGCTGGGC TTCAAAAAGC ACTCTGGCGA TCTGCTGGAC
GAAACGCTGA TTGAGCGCGT GTTTGTGATG AAATCCGGGG AACTGACGTC ACGTCTACAG
GAGTTGTTGT CAGAGATTCC GATGGATGTC ATCACGACAG CAGACAAGAT CATCCTGTTG
GCAAAGGATC GGCTGCCTGG GAAACTGCAA AACAGCGTCT ATATCTCTTT AACGGATCAC
TGCCACTTTG CGATAGAGCG CCACAAACAG GGCGTGGATA TCCGCAATGT TCTGCTATGG
GAAATAAAGC GCCTGTATCC AAAAGAATTC GCTGTCGGTC TGGAAGCGCT GGATATTATT
GAGCAGCGTT TGGCCGTGCG ATTACCGGAA GATGAAGCCG GGTTTATTGC TTTGCATTTG
GTGAACGCGC AGCTCGACAG TGAAATGCCG GAAGTACTGC AAATTACTAA AATCATGCAG
GAAATACTGA ATATTGTAAA ATATCAGCTT AACCTGGATT ATAACGAACA AGCGCTAAGT
TATCATCGCT TTGTGACACA TTTGAAGTTT TTTGCGCAGC GGTTAATAGG AAAAAGTACG
GTCTTTAGTG ATGATGAGTC ATTACATGAT GTGGTGAAAG AACGGTATCA ACTGTCTTAT
CGCTGTGCGG AAAAAATACA GGCACACATT ATTCAAAAGT ATCACTACAC GTTAACGAAA
GAAGAGTTGA TGTTCTTAAC GATTCATATT GAACGCGTGC GAACAGAAGG TCAGGATAAA
ATAGAACCAG GTGATGGGGA GTAA
 
Protein sequence
MKIAKILNNN VVTVIDENNN ESVVMGRGLG FKKHSGDLLD ETLIERVFVM KSGELTSRLQ 
ELLSEIPMDV ITTADKIILL AKDRLPGKLQ NSVYISLTDH CHFAIERHKQ GVDIRNVLLW
EIKRLYPKEF AVGLEALDII EQRLAVRLPE DEAGFIALHL VNAQLDSEMP EVLQITKIMQ
EILNIVKYQL NLDYNEQALS YHRFVTHLKF FAQRLIGKST VFSDDESLHD VVKERYQLSY
RCAEKIQAHI IQKYHYTLTK EELMFLTIHI ERVRTEGQDK IEPGDGE