| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2431 |
|---|
| Symbol | |
|---|
| ID | 8133377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2787910 |
|---|
| End bp | 2788479 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644865713 |
|---|
| Product | cytochrome c nitrite reductase pentaheme subunit |
|---|
| Protein accession | YP_003017998 |
|---|
| Protein GI | 253688808 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03146] cytochrome c nitrite reductase, pentaheme subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAT TACGTTCGTT ATTGACTGCC GGGGTGCTGG TATCAGGCAT GCTTTGGGCA
TTGCCAGGGC TGACGCAGCC CGCACCTCAG GCGGAAAAAG GAGAGCGGTG GGAGGTTATG
CCACAGCGCA ATCCTGATGA GGCTTGTCTA CAGTGTCATA AACCGGAAGA GGATGGCATG
CAGGGGAAAC ATGCTTCCGC CATCAACCCG CATAATCAAA AACAGCTGAC CTGTACTAAC
TGTCACGGCA AGCCGTCGCT GCTGCACCGC GAAGGTGTGA AAGATGTCAT GCGTTTTAAC
TTCCCGATGT ACAAGGTGGA AGAACAAAAC GGCGTCTGTA TGTCATGCCA TGCGCCGGAA
CAGTTGCAGA AAGCGTTCTG GCCACACGAT GTGCATGTGA CGAAAGTAGC GTGTGCCAGT
TGCCATCAAC TGCACCCCAC GCAGGATAGT ATGCAGACGC TGAACGACAA GAGTCGCATC
AAACTGTGTG TGGATTGCCA CAGCGACCAG CGTAATAACC CCGATTTTAA CCCAGCCTCA
GTGCATCTGG GTAATAAGAG GCAGCCATGA
|
|---|
| Protein sequence | MSVLRSLLTA GVLVSGMLWA LPGLTQPAPQ AEKGERWEVM PQRNPDEACL QCHKPEEDGM
QGKHASAINP HNQKQLTCTN CHGKPSLLHR EGVKDVMRFN FPMYKVEEQN GVCMSCHAPE
QLQKAFWPHD VHVTKVACAS CHQLHPTQDS MQTLNDKSRI KLCVDCHSDQ RNNPDFNPAS
VHLGNKRQP
|
|---|
| |