Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2430 |
Symbol | |
ID | 8133376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2787242 |
End bp | 2787913 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644865712 |
Product | cytochrome c nitrite reductase, Fe-S protein |
Protein accession | YP_003017997 |
Protein GI | 253688807 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03149] cytochrome c nitrite reductase, Fe-S protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTGCT CTCGTCGTCA ATTTCTTGCC CGTATGGGAG GGCTGATTGC CCTCACCAGC ACGGCGGGGC AGGTTGTCGC ACAGACGCTG AGTATCAACG GCGTCCGCTA CGGCATGATC CACGATGAAT CGCTCTGTAT CGGCTGTACG GCATGCATGG ATGCCTGTCG TGAGGTCAAT CAGGTGCCGG AGGGCGTATC GCGCCTGACG ATCATTCGCA GCGAACCGAT AGGGACGTTC CCGGACGTGA AATACCGTTT TTTCCGTCAT TCCTGCCAGC ACTGCGATCA TGCACCTTGT GTTGACGTGT GTCCTACCGG GGCGTCGTAT CGCGATGCAG CAAACGGCAT TGTGGATGTG AATCCCGATC TGTGCGTAGG GTGCCAATAC TGTATTGCTG CCTGCCCTTA TCAGGTGCGC TTTATTCATC CGAAGACGAA AACGGCGGAT AAGTGCGATT TTTGCCGCAA GACCAACCTG AAAGCCGGAA AGCTGCCTGC CTGTGTGTTG TCTTGTCCGA CCAACGCGCT GACGTTCGGT AACCTTGACG ACCCTGACAG CGAGATTTCC CGCCTGCTTC GTCAACAGCC GACGTATCGC TACAAAATCG CGCTCGGCAC TCGTCCTAAG GTTTATCGCG TACCGTTTAA ATACGGGGAG GTTCATCAAT GA
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Protein sequence | MSCSRRQFLA RMGGLIALTS TAGQVVAQTL SINGVRYGMI HDESLCIGCT ACMDACREVN QVPEGVSRLT IIRSEPIGTF PDVKYRFFRH SCQHCDHAPC VDVCPTGASY RDAANGIVDV NPDLCVGCQY CIAACPYQVR FIHPKTKTAD KCDFCRKTNL KAGKLPACVL SCPTNALTFG NLDDPDSEIS RLLRQQPTYR YKIALGTRPK VYRVPFKYGE VHQ
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