| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2424 |
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| Symbol | |
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| ID | 8133370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2781998 |
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| End bp | 2782630 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644865706 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_003017991 |
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| Protein GI | 253688801 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGAGG CGCGCGATGT GGTTTGCATA CGCGATGAGC ATGTGCTGTT CAGCGCGTTG
TCGTTTACGG CGAGCCCCGG TGAAATGGTG CAGATTGCCG GTGCTAACGG CGTGGGCAAA
ACCTCGCTGC TGCGCATTTT AAGCGGTCTG GCGACGCCCG AGTCGGGGGA AATCCGCTGG
AAGGGGCAAC GCATCAACCG CATGCGTGAG CAGTTTAACC AGCAGCTTCT GTGGCTAGGT
CATCAGCCGG GCATCAAGAG CGTCCTGACC GGTGAGGAGA ACCTCCGCTT TTTCTATCCG
CATCAGCATC AGGAAGCGCA CTGGCAGGCG CTGGCCGCTG TCGGGCTGGC AGGGTATGAG
GACGTACCCG TGGCGCGCCT TTCGGCAGGA CAACAGCGGC GCGTTGCGCT GGCGCGTTTG
TGGCTTACCG ATGTTCCGCT GTGGATTTTG GATGAACCGC TTACCGCGCT CGACGTGGCG
GGCGTCGACA TGCTGACACA GCGTATGGAA CACCATATTG CGCGCGACGG CATCATCATT
TTAACCACTC ACCAGCCGCT GCGTCCGTTC GCTCAGACTA TTCGCTGTAT CCAGCTTACG
CCGAGTGAAG GAGCACTATC ATGCGGCGTC TGA
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| Protein sequence | MLEARDVVCI RDEHVLFSAL SFTASPGEMV QIAGANGVGK TSLLRILSGL ATPESGEIRW
KGQRINRMRE QFNQQLLWLG HQPGIKSVLT GEENLRFFYP HQHQEAHWQA LAAVGLAGYE
DVPVARLSAG QQRRVALARL WLTDVPLWIL DEPLTALDVA GVDMLTQRME HHIARDGIII
LTTHQPLRPF AQTIRCIQLT PSEGALSCGV
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