| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2421 |
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| Symbol | |
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| ID | 8133367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2780329 |
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| End bp | 2780550 |
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| Gene Length | 222 bp |
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| Protein Length | 73 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644865703 |
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| Product | heme exporter protein CcmD |
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| Protein accession | YP_003017988 |
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| Protein GI | 253688798 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACATCG CTTTTACAAG CTGGCAGGAT TTCTTTGCGA TGGGCGGCTA TGCCTTTTAC
GTCTGGCTGG CCGTGGTGCT AACGCTGCTG CCGCTGAGTG CGTTGGTCGG GCAGACCCTC
TGGCATCGTC GTACATTGAT GAACGACATC CGTCGCCAGC AGGCGCGCGA GCAGCGCAAG
AGCACGGCCC GTCAGTCGAA AGCGGTGGAG GTGACGCCAT GA
|
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| Protein sequence | MNIAFTSWQD FFAMGGYAFY VWLAVVLTLL PLSALVGQTL WHRRTLMNDI RRQQAREQRK
STARQSKAVE VTP
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