| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2419 |
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| Symbol | |
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| ID | 8133365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2777898 |
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| End bp | 2779853 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644865701 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_003017986 |
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| Protein GI | 253688796 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCTG AAGTGGGCAA TTATCTGCTC TGTCTGGCGC TGGGCGTTGC GCTATTGCTC
AGTGTGTATC CGCTGTGGGG CGCGGCGCGT CAGGATACCC GCCTGATGGC ATTGGCGCGT
CCGCTTGCCT GGGCGCTGTT TGCATGCATT TTGGCGTCTT TCCTCGTGCT GGTGCATGCG
CTGGTGATCA ATGATTTCAC CGTTCTTTAT GTAGCCAACA ACTCGAACCG TGCGTTGCCG
GTATGGTATC GCGTGGCGGC AGCGTGGGGC GCACATGAAG GGTCGCTGCT GCTCTGGGTG
TTGCTGATGA GCGGTTGGAC CTTCGCCGTG GCGATATTCA GTCGAGGGAT GTCGCTGGAT
GCGGTCGCCC GTGTGCTGGC CGTTATGGGG ATGATTAATG TTGGCTTCTT GCTGTTCATC
ATCCTGACAT CAAATCCCTT TACGCGCACG CTACCGGACT ACCCGATTGA CGGGCGCGAT
CTCAATCCAC TGTTGCAGGA TGTCGGGTTA ATCTTCCATC CGCCATTGCT CTACATGGGC
TATGTCGGGT TTTCTGTGGC GTTTGCCTTT GCGGTCGCTT CGCTGCTGGC GGAACGACTG
GACAGCGCGT GGGCACGCTG GTCCCGACCA TGGACGCAGG CGGCGTGGTC GTTTCTGACG
CTGGGTATTG TGCTCGGTTC GGGCTGGGCG TATTACGAGC TTGGCTGGGG CGGCTGGTGG
TTCTGGGATC CGGTCGAGAA TGCATCATTG ATGCCGTGGC TGGTGGGCAC GGCACTGCTG
CATTCGCTGT CGGTCACCGA AAAACGCGGT AGCTTCAAGG CCTGGACGGT ACTGCTGGCT
ATCGGCGCGT TCTCGCTTTG CCTGCTGGGG ACGTTTCTGG TGCGGTCAGG CGTATTGGTA
TCGGTGCACG CCTTTGCCTC CGATCCGGCG CGCGGCATGT TTATTCTCGC GTTTCTGGTC
ATTGTTATCG GCGGTTCTTT GCTGCTGTTC GCCATCAAAG GCAACCGGGT ACGGGCGCGG
GTAACGAATT CACTCTGGTC GCGTGAGACT TTTCTGCTCG GCAATAACCT GATCCTGATG
GCGGCGACGC TCGTGGTGCT GCTGGGAACG CTGCTGCCGC TGGTGCATAA GCAGTTGGGC
TTAGGCAGCA TCTCGATTGG CGCACCGTTC TTCAACACCA TGTTTACCCT ATTAATGGCA
CCGTTTGCCT TACTGCTGGG CGTAGGGCCG TTGGTTCGCT GGCGGCGCGA TGAACCGCAA
AAGCTGCGTA AGCTGCTGCT GATTGCGCTG GCCGTGACCG CGGCACTGTC GCTGCTGCTG
CCGTGGCTGT TACAGGATTC GCTGGTTGCC ATGACGGTGG TCGGCCTGTC GATGGCGCTG
TGGGTGTTCT TCTTAACGGT ATACGAGCTG CATAGCAATT CCACTCGGCG TCATGGTCTG
CTGCGCGGTT TGACCAAGCT CTCACTGAGC CAGTGGGGCA TGGTGTGCGG CCATATTGGG
CTGGCGGTGA CGGTGGTAGG GATCGCCTTC AGCCAGAATT ATAGCGTTGA GCGGGATGTA
CGAATGCGGG CTGGCGACAG CATCCAAATC CACGATTACC GTTTTACATT TCAAGGCGTG
CGTGATGTCG TTGGGCCCAA CTGGCACAGC GGTAAAGGGA CAATTGAGGT GACGCGTAAC
GGCAAGCCGG AAGCGACGCT GAAAGCGGAA AAACGCTTCT ACAACACCAG CGGCGCGATC
ATGACGGAAG CCGCGATTGA TGCGGGTGTG ACGCGCGATC TCTATGCGGC ACTGGGCGAA
GAGCTGGATG ACGGTAGCTG GGCGGTACGG CTGTATTACA AACCCTTTGT CCGCTGGATT
TGGTACGGCG GGGGGCTGAT GGCGCTGGGC GGTATCTTGT GCATGTTAGA TCCTCGCTAT
CGCCTGCGTC GCGCTGTTAG GGAGGCATCA TCATGA
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| Protein sequence | MMPEVGNYLL CLALGVALLL SVYPLWGAAR QDTRLMALAR PLAWALFACI LASFLVLVHA
LVINDFTVLY VANNSNRALP VWYRVAAAWG AHEGSLLLWV LLMSGWTFAV AIFSRGMSLD
AVARVLAVMG MINVGFLLFI ILTSNPFTRT LPDYPIDGRD LNPLLQDVGL IFHPPLLYMG
YVGFSVAFAF AVASLLAERL DSAWARWSRP WTQAAWSFLT LGIVLGSGWA YYELGWGGWW
FWDPVENASL MPWLVGTALL HSLSVTEKRG SFKAWTVLLA IGAFSLCLLG TFLVRSGVLV
SVHAFASDPA RGMFILAFLV IVIGGSLLLF AIKGNRVRAR VTNSLWSRET FLLGNNLILM
AATLVVLLGT LLPLVHKQLG LGSISIGAPF FNTMFTLLMA PFALLLGVGP LVRWRRDEPQ
KLRKLLLIAL AVTAALSLLL PWLLQDSLVA MTVVGLSMAL WVFFLTVYEL HSNSTRRHGL
LRGLTKLSLS QWGMVCGHIG LAVTVVGIAF SQNYSVERDV RMRAGDSIQI HDYRFTFQGV
RDVVGPNWHS GKGTIEVTRN GKPEATLKAE KRFYNTSGAI MTEAAIDAGV TRDLYAALGE
ELDDGSWAVR LYYKPFVRWI WYGGGLMALG GILCMLDPRY RLRRAVREAS S
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