| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2415 |
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| Symbol | |
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| ID | 8133361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2774983 |
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| End bp | 2775585 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865697 |
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| Product | cytochrome c-type protein NapC |
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| Protein accession | YP_003017982 |
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| Protein GI | 253688792 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGC CAGGAAAAGT GGGACGGTTG TTGCGCCAGC TATGGCAATG GTGGCGCCGC
CCGAGTCGGC TGGCGCTGGG AACATTGCTC ATTATCGGCT TCGCAGGCGG TATTTTCTTT
CTGGCGACGT CCCAGAAAGG CATGGAAATG AGCAACAGCG AAGCGTTCTG CATCAGCTGT
CATGAAATGC GTAATACCGT CTATCAGGAA TATATGGAAA CCGCGCACTA CAGCAACCGC
AGCGGCGTAC GCGCCACCTG TCCCGATTGC CACGTTCCGC ATGAGTTTGT GCCGAAAATG
GTACGTAAGA TTCAGGCCAG TAAAGAGCTG TACGGCAAAA TAATGGGCAC GATTGATACG
CCACAAAAAT TTGAAGCACA CCGGCTGACG ATGGCGCAGA ACGAATGGCG GCGCATGAAA
AACAACAATT CTCAGGAATG CCGCAACTGC CACAACTTTG ACTATATGGA CTTCTCAGGG
CAAAAAACGG TCGCGGCGGA AAAACACAGC GAAGCGATAA AACTCGGTCA AACCTGTATC
GACTGCCATA AAGGCATCGC CCACAAACTG CCGGACATGC ACGGCGTCAA AAGCGGGTTA
TAA
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| Protein sequence | MKQPGKVGRL LRQLWQWWRR PSRLALGTLL IIGFAGGIFF LATSQKGMEM SNSEAFCISC
HEMRNTVYQE YMETAHYSNR SGVRATCPDC HVPHEFVPKM VRKIQASKEL YGKIMGTIDT
PQKFEAHRLT MAQNEWRRMK NNNSQECRNC HNFDYMDFSG QKTVAAEKHS EAIKLGQTCI
DCHKGIAHKL PDMHGVKSGL
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