| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2411 |
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| Symbol | |
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| ID | 8133357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2770506 |
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| End bp | 2772992 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865693 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_003017978 |
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| Protein GI | 253688788 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA GTCGACGACA CTTTATGAAG GCGAACGCTG TCGCAGCGGC CGCGGCGGTC
GCGGGCATCA CCATCCCTAT CGCGGTCCGC GCCGCGACCG AGCAGTCAGA AGCCATCCAC
TGGGATAAAG CACCCTGCCG TTTCTGTGGC GTAGGGTGTG GTGTGCTGGT CGGGACGCAA
AACGGCCGCA TCGTCGCCAG TCAGGGCGAT CCCGACGCAC CGGTTAACCG TGGTTTAAAC
TGCATCAAGG GCTATTTCCT GCCAAAAATT ATGTACGGAC AGGATCGCCT GACACAGCCT
TTGCTGCGGA TGCGCGACGG CAAATTCGAT AAAGAAGGCG AATTTACCCC GATCTCCTGG
GACAAAGCCT TTGACATCAT GGCGGAGAAA TTCAAAACCG CCCTGAAAGA GAAAGGTCCG
AACGCAATAG GGATGTTTGG CTCCGGACAA TCGACGATTT GGGAAGGCTA TGCGGCCGCC
AAATTGTTCA AAGCAGGTTT CCGCTCCAAC AATATTGACC CCAACGCGCG CCACTGTATG
GCATCGGCGG TCGTGGGCTT TATGCGTACC TTCGGTATGG ATGAACCGAT GGGCTGCTAC
GACGATATCG AGCAGACCGA TGCGTTTGTG CTGTGGGGCT CCAATATGGC GGAGATGCAC
CCGATTCTCT GGTCGCGCAT CACCGACCGC CGCCTGTCGA ACAGCAATGT TACCGTCGCC
GTGCTATCCA CCTATCAGCA CCGCAGTTTT GAGCTGGCGG ATAACGGTAT GGTGTTTACA
CCGCAAACCG ATCTGGCCAT TCTCAACTAC ATCGCTAACT ACATTATTCA AAACAATGCG
GTGAACGAGG CCTTCTTTAC CCGCCACGTG AACCTGCGCA GAGGCGTGAC CGATATCGGC
TACGGACTGC GTCCGACGCA CCCGCTGGAG AAAGCGGCGA AAAATCCAGG CTCCGACGCG
TCCGAACCCA TGAGTTTTGA AGAATATAAA GCCTTTGTCG CCGACTACAC GCTGGAAAAA
ACAGTCGCCA TCAGCGGCGT CCCTGCCGAC CAGCTAGAAG CGCTGGCAAA ACTCTACGCC
GATCCGAAGA AGAAAGTGAT CTCTTACTGG ACGATGGGCT TTAACCAGCA CACACGCGGC
GTATGGGCGA ACAATCTGGT TTATAACATC CACCTGTTGA CGGGCAAGAT CTCCCAACCT
GGCTGCGGGC CGTTCTCATT AACCGGTCAA CCTTCTGCCT GCGGTACTGC ACGTGAGGTC
GGCACCTTCG CCCACCGTTT ACCTGCGGAC ATGGTGGTAA CCAACGAGAA ACACCGCGCG
ATAGCGGAAA AACTGTGGCA GTTACCGACC GGTACCATTC CTGAAAAGAT CGGTCTGCAC
GCCGTCGCAC AAGATCGGGC GCTGAAAGAC GGCACGCTGA ATGCCTATTG GGTGATGTGT
AACAACAACA TGCAGGCCGG CCCGAACATC AATCAGGAGC GTATGCCAGG CTGGCGCGAC
CCACGCAACT TTATCGTCGT TTCCGATCCC TACCCGACCG TCAGCGCGTT GGCTGCCGAT
CTGATTTTGC CGACTGCAAT GTGGGTGGAA AAAGAAGGCG CTTACGGCAA CGCCGAACGC
CGGACGCAGT TCTGGCGCCA GCAAGTGAAA GCGCCGGGCG AATCAAAATC GGATCTGTGG
CAGGTCGTGA GCTTTGCCAA GCGCTTCGCC GTAGAAGAAG TCTGGCCGGA AGAACTTCTG
GCGCAGAAAC CGGCCTATCG CGGCAAGACG CTCTACGACG TGCTGTTTGC GAACGATGTC
ACCACGCGCT TCCCACTCAG TGAATTAGCG GAAAATCAGC TGAACGACGA ATCCCGAGAC
TTCGGTTTTT ATCTGCAAAA AGGCCTGTTT GAAGAATACG CCGCGTTTGG CCGTGGGCAC
GGTCACGACC TGGCGCCATT CGATGACTAC CACAAAGCTC GTGGGCTACG CTGGCCAGTG
GTTAACGGTA AGGAAACGCA GTGGCGCTAT AGCGAAGGGC ACGATCCTTA CGTCAAAGCG
GGAGAAGCCT ACCGTTTTTA CGGTAAACCG GATGGCAAAG CGGTGATTTT CGCGCTGCCG
TACGAACCTG CCGCCGAAGC GCCGGACGAC GAGTACGATC TCTGGCTCTC CACTGGTCGC
GTGCTGGAGC ATTGGCACAC CGGCAGCATG ACGCGTCGCG TACCGGAACT GCACCGTGCC
TTCCCCGAGG CCGTGCTGTT TATCCACCCA CAGGATGCCA AAGCACGCGA CCTGCGTCGC
GGTGAGAAAG TGCGCATTAT TTCGCGCCGT GGTGAAGTCG TCTCCGTGGT TGAAACGCGA
GGCCGTAATA AACCACCGCG TGGACTGGTG TATATGCCGT TCTTCGACGC CGCGCAGATG
ACTAACGTCC TGACGCTGGA TGCCACCGAT CCGCTGTCGA AAGAAACGGA CTTTAAGAAA
TGCGCCGTCA AGCTGGCTAA GGTGTAG
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| Protein sequence | MKLSRRHFMK ANAVAAAAAV AGITIPIAVR AATEQSEAIH WDKAPCRFCG VGCGVLVGTQ
NGRIVASQGD PDAPVNRGLN CIKGYFLPKI MYGQDRLTQP LLRMRDGKFD KEGEFTPISW
DKAFDIMAEK FKTALKEKGP NAIGMFGSGQ STIWEGYAAA KLFKAGFRSN NIDPNARHCM
ASAVVGFMRT FGMDEPMGCY DDIEQTDAFV LWGSNMAEMH PILWSRITDR RLSNSNVTVA
VLSTYQHRSF ELADNGMVFT PQTDLAILNY IANYIIQNNA VNEAFFTRHV NLRRGVTDIG
YGLRPTHPLE KAAKNPGSDA SEPMSFEEYK AFVADYTLEK TVAISGVPAD QLEALAKLYA
DPKKKVISYW TMGFNQHTRG VWANNLVYNI HLLTGKISQP GCGPFSLTGQ PSACGTAREV
GTFAHRLPAD MVVTNEKHRA IAEKLWQLPT GTIPEKIGLH AVAQDRALKD GTLNAYWVMC
NNNMQAGPNI NQERMPGWRD PRNFIVVSDP YPTVSALAAD LILPTAMWVE KEGAYGNAER
RTQFWRQQVK APGESKSDLW QVVSFAKRFA VEEVWPEELL AQKPAYRGKT LYDVLFANDV
TTRFPLSELA ENQLNDESRD FGFYLQKGLF EEYAAFGRGH GHDLAPFDDY HKARGLRWPV
VNGKETQWRY SEGHDPYVKA GEAYRFYGKP DGKAVIFALP YEPAAEAPDD EYDLWLSTGR
VLEHWHTGSM TRRVPELHRA FPEAVLFIHP QDAKARDLRR GEKVRIISRR GEVVSVVETR
GRNKPPRGLV YMPFFDAAQM TNVLTLDATD PLSKETDFKK CAVKLAKV
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