Gene PC1_2409 details

Gene Information

• Locus tag: PC1_2409
• ID: 8133355
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 2769656
• End bp: 2770192
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644865691
• Product: ferredoxin-type protein NapF
• Protein accession: YP_003017976
• Protein GI: 253688786
• COG category: [C] Energy production and conversion
• COG ID: [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
• TIGRFAM ID: [TIGR00402] ferredoxin-type protein NapF

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAACC TTTCCCGACG TTCCCTACTG ACTGGAGGCC TACAGCGGGC AGACAACGCG 
TTGCGTCCGC CGTGGAGCGG CGTAGAAAGT CGGTTTCTGA GCCAGTGCAT ACGCTGTAAC 
GCCTGCATTG ATGCCTGCGA TTCGGGGATC ATTCAGCGCG GCTCGGGCGG TTTTCCCACC 
ATCGATTTTC AGCGCGGCGA ATGCACGTTC TGCTACGACT GCGCGCGTGC CTGTCCACAA 
GCGCTGTTCG CGGAGAGCCA CACCACGCCG TGGGAATACC ACCTGACAAT TCAGGACGCC 
TGTTTGTCGC TGCATCAGGT GGAATGCCGC AGCTGTCAGG ATGCGTGTGA CGCCGGGGCG 
ATACGGTTTC GTCCCGCCAT TGGGCGCGTT GCCGCACCGT CAATCGACGA CGATGCCTGT 
ACCACCTGTG GCGCCTGTAT TTCCGGATGC CCTGTCGGCG CGATATCGAT GAAAAAGATC 
ACTGCGGGAC ATCACCCCGC ACCAACGCGT CTCCTGACGC AACAGGAAAA CCGATGA 

 

Protein sequence

MTNLSRRSLL TGGLQRADNA LRPPWSGVES RFLSQCIRCN ACIDACDSGI IQRGSGGFPT 
IDFQRGECTF CYDCARACPQ ALFAESHTTP WEYHLTIQDA CLSLHQVECR SCQDACDAGA 
IRFRPAIGRV AAPSIDDDAC TTCGACISGC PVGAISMKKI TAGHHPAPTR LLTQQENR