| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2407 |
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| Symbol | |
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| ID | 8133353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2767686 |
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| End bp | 2769404 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865689 |
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| Product | nitrate/nitrite sensor protein NarQ |
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| Protein accession | YP_003017974 |
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| Protein GI | 253688784 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAC GTCCTGTTTC TACCAGCCTG GCTCGCGCGT TTTTTTATAT CGCGCTGCTT
TCATTCCTGA CGACCGGCAT TGCACTGCTA ACGCTGGCCA GTGGTTTACG CGATGCAGAA
GCGATCAACG TTGCTGGCTC CATGCGTATG CAAAGCTATC GTATGGGATA TGACTTGCAG
GGCGATCGCG CAGAATTAGC ATCGCATCGC CGCCTTTATG CGCAAACGCT GGACTCCCCG
GTTTTTCACC TGTTGGATCG CTGGTATGTG CCGCGCGATG TACGCGATCG CTATGCTGCG
CTGTTGCAAA GCTGGAAAAC GATGGATGAG CGCCTGAACG CGGGGGATCG GGCGTGGTAT
CAGGACAACA TTGTTCGCTA TGTCACGCAG ATCGATCTCT TTGTGCTGGC GTTGCAGCAC
TATTCCGAAC GCAAGATGAT GATAGTTGTT GTGACATCAA TAATTGGTTC GATCACTATC
TATATACTGA TCTTCTTTAC GCTGCGCCGC ATCCGCCGTC AGGTGGTCGT GCCGTTGAAT
AAGCTGATGG CGGCCTGTGC GTCTATTGAA AAGGGGCGTT TTACCCATTC GCGGCTGGAC
GTCAATTTGC CTAACGAACT GGGTTTACTG GCGCAAACCT TCAGTAGCAT GACTGATGAA
CTGCAAAAGC TTTATCGTTC TCTGGAAGGC AAGGTACGGC AGAAAACGCT GCGCTTGCAG
GAAGTGAACC GCATGCTGAA GGTGCTGTAC AACTGCTCTC AGGCGATGAA TGTCAGCACC
ATCGACAGAC ATTGTTTTCA GCAGATTCTG CAAATTGTTC GCCGCTATGA AACGGTTGGC
TGTCTGGAAA TGCGGGTAGG AGAGAACTGG CGGTTATGTG AAGGCCAGCC GGATGAGCAG
GCTGCGTGGC AGACCTTGCC CATCCGTTTG CAAGAGGTTG AGTTTGGTCA ACTGCGATGG
CAGGCATCAA CGCAGCAACC GTCGGCGCAG CTGATGGAAA GCGTTGCTAA TATGCTGGGC
CGTGGCCTCT ATTTTAATCA GGCGCAGAAG CACTACCAGC AGCTATTACT GATGGAGGAA
CGCGCCACCA TCGCGCGTGA ACTGCATGAC TCACTGGCTC AGGTGCTCTC TTATCTGAAT
ATCCAGATGA CGTTGTTAAA GCGTGCGGTC GCGGAAGAAA ATGCGCAGGC CCGGCAGATC
ATCACCGATT TTGAACAGGC GCTCAGTGAT GCTTATCGCC AACTGCGGGA ACTGCTGGGT
ACGTTCCGAC TGACGCTGCA ACAGGCCGAT TTGCCCGCGG CGATGCAGGA AATGATTGCG
CCGCTGCGCG CGCAAACTCC GGCGGCAATC ACGATTGACT GCCGGATTCC TACGCAAGCG
CTGGATGCCT CACAGCAGGT TCACTTGCTA CAAATCATCC GTGAAGCGGT GCTGAACGCC
ATTAAACACG CGCAGGCGAC GGCGATTACC GTCAACTGTC GGACGCAGCC TGATGGCCGT
CATTGTGTTG ATATTCGTGA TGACGGCTGT GGCATTATCA ATCAGGAGGA ACCCGCAGGA
CACTACGGTT TAAATATTAT GCAGGAGCGT GCCGAACGGT TAGGTGGAAA GTTATCTATC
GGCCTTCACC CTGAAGGGGG AACGCAGGTT AGCGTCTGTT TCTCGACGCC GACGGCAGCG
CGTGAACGCG ATAACACGAA CACTCTCTAC CCGGAATAA
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| Protein sequence | MVKRPVSTSL ARAFFYIALL SFLTTGIALL TLASGLRDAE AINVAGSMRM QSYRMGYDLQ
GDRAELASHR RLYAQTLDSP VFHLLDRWYV PRDVRDRYAA LLQSWKTMDE RLNAGDRAWY
QDNIVRYVTQ IDLFVLALQH YSERKMMIVV VTSIIGSITI YILIFFTLRR IRRQVVVPLN
KLMAACASIE KGRFTHSRLD VNLPNELGLL AQTFSSMTDE LQKLYRSLEG KVRQKTLRLQ
EVNRMLKVLY NCSQAMNVST IDRHCFQQIL QIVRRYETVG CLEMRVGENW RLCEGQPDEQ
AAWQTLPIRL QEVEFGQLRW QASTQQPSAQ LMESVANMLG RGLYFNQAQK HYQQLLLMEE
RATIARELHD SLAQVLSYLN IQMTLLKRAV AEENAQARQI ITDFEQALSD AYRQLRELLG
TFRLTLQQAD LPAAMQEMIA PLRAQTPAAI TIDCRIPTQA LDASQQVHLL QIIREAVLNA
IKHAQATAIT VNCRTQPDGR HCVDIRDDGC GIINQEEPAG HYGLNIMQER AERLGGKLSI
GLHPEGGTQV SVCFSTPTAA RERDNTNTLY PE
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