| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2405 |
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| Symbol | |
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| ID | 8133350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2765243 |
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| End bp | 2766034 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865686 |
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| Product | HAD-superfamily hydrolase, subfamily IIB |
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| Protein accession | YP_003017972 |
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| Protein GI | 253688782 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAAGT TGGTAATTAC CGATCTGGAC GGCACGTTTC TTCACAGCGA TGGCGATTAC
AACAGGACTC TGTTTGCTGA GGTTTATGCG TTAATGAAAG ATAAGGGCGT GCAGTTTGCC
GCCTGTACGG GTAAGCAGTG CGAGCGGGTC GAAGCGCTTT TTGGTGATGT TGCAAAAGAC
ATCTGGATTT TGGGAGATAG CGCGACGCGC ATCAAATATC GGGGAGATTA CGTTTACCAA
TCGCTTATCA AAAACCGTCT GGCCTTGAGT CTGATTGGCG TGCTGGAAAG TGTGGATGAC
CGACACGTAG TCATCGGTTG TACCCCACAT GGTGCGATGG TCAGGGAAAC GATCGACCCG
GCTTTACTGG AAAAGGTAAA GAAGTCGTAC ACCAACGTGA CGCTGATCTC CAGCTTTGCT
GCCGTCACCG ATGACTTTGT GAAAATCACG GTTTATGACC CGGAAGGGCA CTGTCATGAG
ACGGCGAAGT ATCTCGATGC GTTTCACGAT CATGTCTATA TCGTGGTCTC TGAAGCGGCT
TGGATCGATA TTGCTAATGT CGGCGTACAC AAAGGGCATA CTGTAGACAT CCTTCAGGAC
AAATTGGCGG TGACGGCAGA GGAAACGATG GTGTTTGGCG ACGGCTACAA TGATATTGAG
TTAATGAGCC GCGGGGCTTA CAGCTTTGCG ATGCGCAACG CGTTTGAGGA AACCAAAGCC
GCGGCGAACT TTGTTGCCCG TAGCAATGAC GACGATGGGG TTCTCAACAC GATAAAGCTG
CTGCTTTCAT GA
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| Protein sequence | MIKLVITDLD GTFLHSDGDY NRTLFAEVYA LMKDKGVQFA ACTGKQCERV EALFGDVAKD
IWILGDSATR IKYRGDYVYQ SLIKNRLALS LIGVLESVDD RHVVIGCTPH GAMVRETIDP
ALLEKVKKSY TNVTLISSFA AVTDDFVKIT VYDPEGHCHE TAKYLDAFHD HVYIVVSEAA
WIDIANVGVH KGHTVDILQD KLAVTAEETM VFGDGYNDIE LMSRGAYSFA MRNAFEETKA
AANFVARSND DDGVLNTIKL LLS
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