| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2404 |
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| Symbol | |
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| ID | 8133349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2764422 |
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| End bp | 2765195 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865685 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_003017971 |
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| Protein GI | 253688781 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCGATT ACACCGACTT TCCCGAACAG CGGCAAGCCA AAATCCGGCA AATCCTCAGC
GAGGAAGGCA AAGTCGTCTG CACGCAGCTC TCACGCGAAT TGAACGTATC CGAGCACACC
ATACGTCGCG ACCTGAAGGA ACTGGCGCAA TCCGGTGCCT GTAAGCGCGT CTACGGCGGA
GCGGTCATCA TGCCACCAGA AGCCATCGAT TTTGCCAGCC GAGCGAGTAT CGATGCCGTC
CAGAAAGATC GTATCGCTCA GGCCGTTATC CCGCTGATAA AACCTAACAG TTGCGTCTTC
TTTGACACTG GCACCACCAA TCTGGCAGTG GCGAAGCAGC TTCCGCTGGG TCTGAAATTT
ACCGCCGTGT GTAATTCGCC CATTATCGCG ACAGAGCTGA TGCAACATCA GGATGTAGAA
GTGATTTTTC TTGGCGGACG GATCCAGAAA GAAGTCGGCG GCGCAATTGG TATCGATACG
CTCAGGCAGC TAGAAAAGAT GTATTTCGAT CAATGCCTGC TGGGGGGCTG TGCCTTTGAC
GCCAATGAAG GATTGACCGT TTTTGAATAT GACGATGCAG AATTCAAAAA GTGCCTGGTC
ACCCGCAGCA GCGAAGTGAT CGTCGCGCTG ACCGCGAATA AGATCTCCGC TTTGGCGCGC
TATCGCGTCG CTGGGTGTGA GGATATTACC GCGCTGGTGA CCGATGATGA AATCGCCCCT
GCCTGTCAGG ACGCATTAAG CGAAAAAAAC CTGGATCTGA TTATTGCCAG ATAA
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| Protein sequence | MFDYTDFPEQ RQAKIRQILS EEGKVVCTQL SRELNVSEHT IRRDLKELAQ SGACKRVYGG
AVIMPPEAID FASRASIDAV QKDRIAQAVI PLIKPNSCVF FDTGTTNLAV AKQLPLGLKF
TAVCNSPIIA TELMQHQDVE VIFLGGRIQK EVGGAIGIDT LRQLEKMYFD QCLLGGCAFD
ANEGLTVFEY DDAEFKKCLV TRSSEVIVAL TANKISALAR YRVAGCEDIT ALVTDDEIAP
ACQDALSEKN LDLIIAR
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