Gene PC1_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2388 
Symbol 
ID8133332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2745832 
End bp2746857 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content54% 
IMG OID644865668 
ProductDNA-binding transcriptional repressor PurR 
Protein accessionYP_003017955 
Protein GI253688765 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.282493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGA TTAAAGATGT GGCAAAACGT GCTGGCGTTT CCACCACAAC CGTATCGCAC 
GTGATCAATA AAACACGTTT CGTCGCCGAA GAGACCAAGG CAGCCGTCAG GGCGGCAATC 
AAAGAATTGC ACTATTCGCC CAGCGCCGTC GCCCGCAGCC TCAAAGTTAA TCACACCAAA 
TCTATCGGTT TGCTGGCCAC ATCCAGCGAA GCGCCCTACT TCGCCGAAAT CATTGAAGCT 
GTCGAGAACA GCTGCTACGC CAAAGGTTAC ACGCTGGTGC TGTGTAATTC GCATAACGAC 
ATCGGTAAAC AGCGCGCTTA TCTCTCCATG CTGGCGCAAA AACGCGTCGA CGGCCTGCTG 
GTCATGTGCG CCGAATATCC ACCTGAACTG TTGGCGATGC TGAAAGATTA TCGCAGCATT 
CCGATGGTCG TGATGGACTG GGGACAGATG CACAGCGATT TTACCGATAC GATTATCGAT 
AACGCCTTTG AAGGCGGTTA TATGGCCGGT CGCTACCTGA TCGAACGTGG CCATCGGGAT 
ATCGGTGCTA TTCCTGGTAT TCAAGAACGT AACACCGGCA GCGGACGCTA CCTCGGCTTT 
TTAAAAGCGT TGAAGGAAGC CGACATCACT GTGCGTGAAG AGTGGGTTGT TCAGGGCGAT 
TTCGAGCCGG AGTCCGGTTA TAAAGCCATG CATCAGATTC TCGCGCAGAA ACAGCGGCCA 
ACGGCCGTAT TCTGCGGTGG CGATATCATG GCGATGGGCG CGATCTGTGC GGCAGATGAA 
TTAGGTCTGC GCGTGCCGCA GGATATTTCG GTGATCGGTT ATGACAACGT GCGCCACGCG 
CGTTTCTTTA CGCCAGCACT GACGACCATC CATCAGCCGA AAGAGCGTCT GGGGCAGTCT 
GCTTTCGCGA TGTTGCTGGA TCGCATTACC AGTAAGCGGG AAGATGCGCA CGTCATCGAA 
GTGCACCCGA CGCTGATTGA GCGCCGCTCG GTTGCAGACG GCCCTTACCT CGACTATCGC 
CGCTAA
 
Protein sequence
MATIKDVAKR AGVSTTTVSH VINKTRFVAE ETKAAVRAAI KELHYSPSAV ARSLKVNHTK 
SIGLLATSSE APYFAEIIEA VENSCYAKGY TLVLCNSHND IGKQRAYLSM LAQKRVDGLL 
VMCAEYPPEL LAMLKDYRSI PMVVMDWGQM HSDFTDTIID NAFEGGYMAG RYLIERGHRD 
IGAIPGIQER NTGSGRYLGF LKALKEADIT VREEWVVQGD FEPESGYKAM HQILAQKQRP 
TAVFCGGDIM AMGAICAADE LGLRVPQDIS VIGYDNVRHA RFFTPALTTI HQPKERLGQS 
AFAMLLDRIT SKREDAHVIE VHPTLIERRS VADGPYLDYR R