| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2387 |
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| Symbol | |
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| ID | 8133331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2744389 |
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| End bp | 2745240 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644865667 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003017954 |
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| Protein GI | 253688764 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.05451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTAT TTATTACTCT TTTTATATTA TTTTTCAGTA ATCTATCCCT GAACGTCGTT
CAGGCTGCGC CGCATACCCC GCATTCTGCG CCGAAGAAAA GCGCCGTTGA AGAAACCAAC
AAGAAAAGCC GTCAAACAAA GGGTAATGCT AAATCACCGA CACCGATCAA AAGCAAAAAA
CCAGAACCTA CCGCCGCCAG CACGAAAACC AAGCCCCGTA GCGCGAACAA ATCAACAGAG
AAAAAGCCAT CCCGGACGCA AAGCAGCACG CCCGCGCTAG TGAAAAAAAA CCTCAAAAAG
CTGAAACCTG AAGAAGAGAA GCAGACGACC GCACAGGTCA GAGTCAAAAC CGGGCTGAAA
AAGACAGTGC TCAAGGGAAA GGTAGATAAA AACCCGTCAC CCACGGAAAA AGGAATGGCG
CTGAGCGCGG CACATAAAAA GCGTTATCAG CATGCCAAAA CGACAGCAAT GAATAAGTTG
ATGAGCCAGA TAGGTAAGCC TTATCACTGG GGCGGTTCAT CACCCTTTAC TGGATTCGAC
TGCAGCGGGC TGGTCTATTA CGCATACAAA GATGTCGTTA AGATTCAAAT TCCGCGCACC
GCTAACGAAA TGTATCATCT GCGTGACGCC GCTCCGATTA AAAAGAGCGA ACTGGAAAGC
GGCGATTTGG TGTTCTTCCG CATCAATAAT CGTGGCGCAG CCGATCACGT CGGAGTTTAT
CTGGGAGAAG GGAAATTTAT TCAGTCGCCG CGTACCGGTT CAGATATTCG TATCAGCAAG
CTGAGTGAAG ATTACTGGCA GGAGCACTAC GTGGGCGCGC GTCGCGTGGT CACACCGCAG
ACAATTCGTT AA
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| Protein sequence | MRLFITLFIL FFSNLSLNVV QAAPHTPHSA PKKSAVEETN KKSRQTKGNA KSPTPIKSKK
PEPTAASTKT KPRSANKSTE KKPSRTQSST PALVKKNLKK LKPEEEKQTT AQVRVKTGLK
KTVLKGKVDK NPSPTEKGMA LSAAHKKRYQ HAKTTAMNKL MSQIGKPYHW GGSSPFTGFD
CSGLVYYAYK DVVKIQIPRT ANEMYHLRDA APIKKSELES GDLVFFRINN RGAADHVGVY
LGEGKFIQSP RTGSDIRISK LSEDYWQEHY VGARRVVTPQ TIR
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