Gene PC1_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2366 
Symbol 
ID8133310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2722776 
End bp2723819 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content38% 
IMG OID644865646 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003017933 
Protein GI253688743 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0010665 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAG CAGTATATGA TGGCAATGGA AAAATTTCAT GGAAAGAAGT GAAGGATGCA 
ACACTAGAAG AAAATACTGA TGCTTTAGTA AAAATAATAA AAACCACTAT TTGTGGCTCA 
GACTTACATA TATTGAAAGG AGATATGCCG TACGTACCCA GTGGTAGAGT ATTGGGACAC 
GAAGGTATAG GTGTTGTAGA AGAAATTGGA GAGGCGGTAA CTCAATTCAA AAAAGGTGAT 
AAAGTTGTTA TTTCTGCAAT TTCATATTGT GGAAAATGTC ACCATTGTAA AAAAGGCCTA 
TATTGCCACT GTGAGTCCAA AGATGGTGGA TGGGTTTTAG GTAACTCTGT CAACGGTACT 
CAAGCTGAAT ATACTCGGAT TCCGCATGCA GATAATTCGT TGATTAAAGT ACCAGAAAAC 
GTAGATGAAG AGTCAGCACT GATGTTAAGC GATATCCTGC CGACAGGGTT TGAAGTTGGA 
GTCCTGGCAG GCGAAGTTAA ACCAGGTCAA AAAATTGCAA TTATTGGTGC TGGTCCAGTT 
GGACTATCTG TACTCATCAC ATCTCAATTC TATTCTCCAG CCAAAATAAT TATGATTGAT 
ATGGACAAAT CCAGATTAGA AATGGCAAAA CAGCTTGGGG CAACTCATAC AATAAATCCC 
CAATCAGATG ATTATGCATC CATATGTAAA GAACTAACTG ATGGATACGG TGTTGATGTC 
GCTATTGAAT GTGTTGGCAT ACCAGACACG TTTGAAATGT GCCAAGAAAT AATAGCCAAA 
GGTGGAAGAA TCGCTAATAT AGGCGTTCAT GGTAAAAAAG TAGATTTACA CATGGATAAA 
CTATGGGGAA GTAACATACA GATAACGACT GGTTTTGTAT GCACTCATAG CACACCAATG 
CTAATGGAAA GTATTTCTTC AGGGAAAATA GATCCCAAAA AGTTAATATC TCACCATTTT 
AAGCTGGACG AAATTGAAAA GGCATATCAG GTCTTTGGAA ATGCCGCCAA AGAAAAAGCC 
ATCAAAATAA TATTGAGTAA ATAA
 
Protein sequence
MKAAVYDGNG KISWKEVKDA TLEENTDALV KIIKTTICGS DLHILKGDMP YVPSGRVLGH 
EGIGVVEEIG EAVTQFKKGD KVVISAISYC GKCHHCKKGL YCHCESKDGG WVLGNSVNGT 
QAEYTRIPHA DNSLIKVPEN VDEESALMLS DILPTGFEVG VLAGEVKPGQ KIAIIGAGPV 
GLSVLITSQF YSPAKIIMID MDKSRLEMAK QLGATHTINP QSDDYASICK ELTDGYGVDV 
AIECVGIPDT FEMCQEIIAK GGRIANIGVH GKKVDLHMDK LWGSNIQITT GFVCTHSTPM 
LMESISSGKI DPKKLISHHF KLDEIEKAYQ VFGNAAKEKA IKIILSK