| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2360 |
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| Symbol | |
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| ID | 8133304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2716361 |
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| End bp | 2717542 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865640 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003017927 |
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| Protein GI | 253688737 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.136673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATTG CTTTATGGGC TCTGGTTATT GGCGCCTTTG GGATTGGAAC GACAGAATTC
ATCATCGCGG GTTTGCTGCC GGCAATCGCT ACCGATTACG GAGTAACAAT TCCTGTGGCG
GCATATATGG CGACAAGCTA CGCGCTTGGG GTCTTTGTCG GCGCGCCTGT ACTTATTATT
CTCGGTTCCC GGCTACCCAA AAAAACCATG CTGGTTTTTC TTGCCGGACT CTTTATTCTG
GGGAATTTGG TCACCGCTCT CGCACCGTCT ATAGGCATAG CGATCGTCGG ACGCATTATC
ACGTCTCTGA CACACGGTGC CTTCTTCGGG ATTGGCTCTG TACTCGCCGC GGAAATGGTG
CCTAAAGAGA AGCGTGTCAG TGCTATCGCC TTTATGTTCT CCGGCCTTAC GGTCGCGAAC
CTTATCGGCG TCCCAGTAGG AACCTGGATT AGCCATCAGT TTTCCTGGCA AGCCACGTTC
TACGCTATCA CGGTGATTGG GGTCGCCACG GCGATCGGCG TAATTATGCT TATTCCTCCC
ACAGCCAAAC CCAAAGCACA ACATATCGGG CATGAGTTTG CCGCATTCGG AAACTCAAAA
GTCCTACTGT CAATGGGCAT CACTATTCTT GGTCCCGCGG CTTTCTTTAC CTCAATTACC
TATATCGCGC CCATGATGAC GGAAGTCGCT CACTTTTCAG AGGGATCGAT TACTTGGCTG
TTGATGGTAT TTGGTTTGGG CTTATTCGTT GGTAACTGGC TGGGTGGCCG TTTCGCTGAC
AGAGCGTTAA TGCCCATGCT GTACATCACG CTGCTTGGAC AGGCTGTCAT TTTGTTTATC
TTCCATTTGA CGGCCAGCAG CCAGACTGCC TCGATAGTGT GCATATTCCT GATGGCGGCT
TTTGGATTTG CGACCGTCTC TCCCATTCAG AAACTGGTGA TGGACAAGGC CAGAGCCGCA
GGTGCGCCGA CTCTGGCTTC CGCGGTCAAT ATTGGTCTCT TTAATCTTGG TAATGCCCTT
GGTGCCTGGG TAGGCGGAAG CGTTATCGCC AGCGGCTTTG GTTTCACTGC GCCAAACTGG
GCTGGCGGGA TCCTGTCGCT GAGTGCACTG ATCCTTGCTA TCGCAGTTGG GGTGGTCGAT
AAACGAAGCA GCCCGTTGAC AGCATCAGTA GAATGCCATT AA
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| Protein sequence | MPIALWALVI GAFGIGTTEF IIAGLLPAIA TDYGVTIPVA AYMATSYALG VFVGAPVLII
LGSRLPKKTM LVFLAGLFIL GNLVTALAPS IGIAIVGRII TSLTHGAFFG IGSVLAAEMV
PKEKRVSAIA FMFSGLTVAN LIGVPVGTWI SHQFSWQATF YAITVIGVAT AIGVIMLIPP
TAKPKAQHIG HEFAAFGNSK VLLSMGITIL GPAAFFTSIT YIAPMMTEVA HFSEGSITWL
LMVFGLGLFV GNWLGGRFAD RALMPMLYIT LLGQAVILFI FHLTASSQTA SIVCIFLMAA
FGFATVSPIQ KLVMDKARAA GAPTLASAVN IGLFNLGNAL GAWVGGSVIA SGFGFTAPNW
AGGILSLSAL ILAIAVGVVD KRSSPLTASV ECH
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