| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2352 |
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| Symbol | |
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| ID | 8133296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2703835 |
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| End bp | 2706201 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865632 |
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| Product | Glucan 1,3-alpha-glucosidase |
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| Protein accession | YP_003017919 |
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| Protein GI | 253688729 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGT TGAAAAATTG GGTGTTCCGT CATCAGAGCG CCGACCATGT TGAATTGCTG
GTGGATGACA GACATGTTTT TCGCCTGTAC GTGCTGGAAC CGATGTTGGC CCGCGTGCTG
GTTAAACAAA ATGGCAAACT GAAGCTGAAT CGCACCTGGA GCATCGCGCC GCAGCAGGAT
GTTCCCTGGC AAGGGCGCAG CCGCGAAAGT AGCGAAGGCT TTAGCCTGCC GGGATTCTCG
CTGGAACAGT TGGACAATGC ATTGCGTGTC AGCACCACGC GGATGCGTAT TACGATTCAT
CAACCGCTGT GGCTGGCGTG GGAATACCGT GATGAACAGG GTGAATGGCA GCCGTTTGCC
GCGGATAGAC CCACCAGCGC CTATCTGCTG AATCCACAGG GTGACGGCGT GGCGCATTAT
CAGCGCCGTT TCCCGACGGA GCGTTATTAC GGTCTGGGCG AGAAGGCGGG CGATCTGGAA
CGCACAGGAC GCCGGTTTGA GTTCCGTAAT CTGGATGCGA TGGGCTACAA CGCGGCGAGT
ACCGATCCGC TGTATAAGCA TGTTCCGTTT ACCATTACCC GACGCGATGA TGTCAGTTTC
GGCCTGTTTT ACGATAACCT GAGCACGACC TGGCTCGATC TCGGCAATGA AATCGATAAC
TACCATCTGG CTTATCGACG TTATCAGGCG GAAGCGGGCG ATCTCGACTA TTACCTGTTC
ATCGGACCGC GCGTGCTGGA TGTGACAAAA GCGTTCGTGC GCCTGACGGG TAAAACGCTC
TTTGGGCCAA AGTGGAGCCT CGGCTATAGC GGTTCCACCA TGCATTACAC GGATGCGCCC
GATGCGCAGC AGCAGCTGAT GAAATTTATC GCGCTGTGCC GCGAACACAA TATCCCGTGT
GATTCATTTC AACTCTCGTC GGGCTACACG TCGATTAACA ATAAGCGCTA TGTGTTTAAC
TGGAACTACG ACAAAGTCCC GCAGCCGGAG GTGATGTCGC AGGCTTTTCA TGATGCGGGC
CTCAAGCTGG CTGCCAATAT CAAACCCTGT TTACTGCAAG ATCACCCCAA ATATGAAGAG
GTATCGGCGC AGGGGCTGTT TATCCTCGAT TCCGAGTCCG ATGTGCCAGA ACGCTCCAGC
TTTTGGGACG ACGAAGGGTC GCACCTTGAT TTCACCAACC CGGCAACGGT GGCGTGGTGG
CAGGAGAACG TCACCCGGCA ACTGCTGGAG AAAGGGATTG ATTCGACGTG GAATGACAAT
AACGAATATG AAGTCTGGGA TGGCGAAGCC CGCTGCCACG GATTCGGCGA CACGATGGCG
ATCAAACACA TTCGCCCACT GATGCCGTTG CTGATGATGC GCGCCTCGCT GGAAGCACAG
CAGCGTTTTG CCCCGACGCT GCGCCCTTAT CTGATCTCGC GTTCCGGCTG TGCGGGAATG
CAGCGCTATG TGCAAACCTG GAGCGGCGAT AACCGCACCA ACTGGCAAAC ACTGCGCTAT
AACACCCGAA TGGGCGTGGG AATGAGTCTG TCCGGCCTAT TTAATGTTGG GCATGATGTC
GGCGGCTTCT CCGGTGACAA ACCGGACGCC GAGCTTTTTG TACGCTGGGT ACAAAATGGC
GTGATGCATC CGCGTTTCAC CATCCATTCC TGGAATGACG ATCATACGGT GAACGAACCG
TGGATGTATC CTGCGGTAAC GCCTGCGATA CGCAGCGCCA TTGAGCTTCG TTATCGTTTG
CTGCCGTATT TTTACACCTT GCTGTGGCAG GCTAGCGCGG ATGATGAACC GATGCTGCGC
CCGACGTTCC TCGATCACGA GCAAGACAGC GCGACGCTGG CAGAAACTGA CGATTTCATG
CTGGGACGCG ATATTCTGGT CGCCAGCGTG GTTGAACCGG GGCAGCGTCA GCGTACGGTA
TATCTGCCAG CGAATACGTC AGGCTGGTAC GATTTTCATT CCGGTCAGTG GTTCAGCGGC
GGACAGACCA TTGTGCTGGA TGCCCCGTTG GAGCGCCTTC CACTGATGGT CCGCGCGGGG
GCGATGATCC CGCTGTCGGA GCGAACGGCA TATGTCAGCC CCCGTGAAGA CGAACAGCGT
GAATTTCTGC TCTTTCCGCC TGCGGCGGGC GGCACGGACA GCGGACTACT GTTTGACGAC
GATGGTGAAA CGTGGCAATG GCGCGAAGGA AACGCGCTGT GGCTGCGCTG GGAAATTCGT
ACGGATAACC AGCGCATTGA CGTGACGTTC ACATCGGAAG GGCGATATCA ACCGGCCTGG
CGGCACGCGA CGCTGCGCTT GCCAATAGGC GAGCAGCGTC AGCTATACAT CAACGGCGTT
CGCACGGATA CCTATCAACA CCAATAG
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| Protein sequence | MKTLKNWVFR HQSADHVELL VDDRHVFRLY VLEPMLARVL VKQNGKLKLN RTWSIAPQQD
VPWQGRSRES SEGFSLPGFS LEQLDNALRV STTRMRITIH QPLWLAWEYR DEQGEWQPFA
ADRPTSAYLL NPQGDGVAHY QRRFPTERYY GLGEKAGDLE RTGRRFEFRN LDAMGYNAAS
TDPLYKHVPF TITRRDDVSF GLFYDNLSTT WLDLGNEIDN YHLAYRRYQA EAGDLDYYLF
IGPRVLDVTK AFVRLTGKTL FGPKWSLGYS GSTMHYTDAP DAQQQLMKFI ALCREHNIPC
DSFQLSSGYT SINNKRYVFN WNYDKVPQPE VMSQAFHDAG LKLAANIKPC LLQDHPKYEE
VSAQGLFILD SESDVPERSS FWDDEGSHLD FTNPATVAWW QENVTRQLLE KGIDSTWNDN
NEYEVWDGEA RCHGFGDTMA IKHIRPLMPL LMMRASLEAQ QRFAPTLRPY LISRSGCAGM
QRYVQTWSGD NRTNWQTLRY NTRMGVGMSL SGLFNVGHDV GGFSGDKPDA ELFVRWVQNG
VMHPRFTIHS WNDDHTVNEP WMYPAVTPAI RSAIELRYRL LPYFYTLLWQ ASADDEPMLR
PTFLDHEQDS ATLAETDDFM LGRDILVASV VEPGQRQRTV YLPANTSGWY DFHSGQWFSG
GQTIVLDAPL ERLPLMVRAG AMIPLSERTA YVSPREDEQR EFLLFPPAAG GTDSGLLFDD
DGETWQWREG NALWLRWEIR TDNQRIDVTF TSEGRYQPAW RHATLRLPIG EQRQLYINGV
RTDTYQHQ
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