| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2344 |
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| Symbol | |
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| ID | 8133288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2695031 |
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| End bp | 2695921 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644865625 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003017912 |
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| Protein GI | 253688722 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTCG ATAACGTTTA TAGCGAAAAA CGGCTGCCAA GCCGACTGGG CGATACCTGG
CGGGCGTTCC ATCAGGATAT GCTCGCGATG ATTGGGCTAT ACGGCTTTCT GATCCTGATT
GGCCTGTGCC TGTTCGGCAA GTTTCTTGCG CCTTATGAAG TGGATCAGCA ATTTTTAGGC
TACCAATTGT TGCCCCCCTC CTGGTCCCAC TATGGTGAAG TGTCGTTCTT TCTTGGCACC
GACGATTTAG GCCGCGACCA GCTAAGCCGC CTGTTGAGCG GCGCGGCGCC GACCGTCGGC
GCATCGCTCA TCGTCACCTA CGCAGCGGCA CTGTGCGGCA TCGTACTGGG CGTTTTTGCG
GGCGTCACCC GCGGGCTGCG CTCTGCGATG CTCAACCATA TTCTGGATAC GCTGCTGTCG
ATTCCATCGC TGCTGCTGGC GATTGTGGTG ATTGCCTTTA TCGGCCCCAA ACTCGAACAC
GCGATGCTCG CCGTCTGGCT GGCGCTGCTG CCGCGTATGG TGCGCACCAT CTACAGCGCC
GTACACGCAG AAATGGACAA AGAGTACGTG ATCGCCGCTC GTCTGGACGG CGCGTCCACG
TTTTATCTGG TGTGGTACGT TGTACTGCCG AACATCGCCG CGCTGCTGGT TTCCGAATTT
ACCCGCGCGC TGTCGATCGC CATTCTGGAT ATCGCCGCGC TAGGCTTTCT CGATTTGGGC
GCACAGCTGC CGACGACCGA ATGGGGCGCG CTGCTTGGCA ACTCGCTGGA GCTGGTTTAT
GCCGCACCGT GGACCGTGAT GCTGCCCGGC GCGGCTATCG CGCTGAGCGT GTTAATCGTC
AACCTGCTGG GCGACGGCAT CCGCCGCGCG CTCGTCGCGG AAACGGAATA A
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| Protein sequence | MPFDNVYSEK RLPSRLGDTW RAFHQDMLAM IGLYGFLILI GLCLFGKFLA PYEVDQQFLG
YQLLPPSWSH YGEVSFFLGT DDLGRDQLSR LLSGAAPTVG ASLIVTYAAA LCGIVLGVFA
GVTRGLRSAM LNHILDTLLS IPSLLLAIVV IAFIGPKLEH AMLAVWLALL PRMVRTIYSA
VHAEMDKEYV IAARLDGAST FYLVWYVVLP NIAALLVSEF TRALSIAILD IAALGFLDLG
AQLPTTEWGA LLGNSLELVY AAPWTVMLPG AAIALSVLIV NLLGDGIRRA LVAETE
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