| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2342 |
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| Symbol | |
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| ID | 8133286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2692340 |
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| End bp | 2694082 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865623 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003017910 |
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| Protein GI | 253688720 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGAG TGCGATACAC TCTGTGTATA ACCGTATTGA CTGAAAAATC CCGTATGTTC
GGAAAAACCT GTTTCGCACT GGCATTCACC TGGCTGGCAT TGCCTGCACT GGCCGCATCG
CCGTCCGTGC CAACGTCACC TGCTCCGCTG GAAAGTATTC ACCAGAGCGG CTTTGTCTAT
TGCGTCAATG ATGTCCTGAA CACGTTTAAC CCGCAGATGG CGCGCAGCGG CGTTACCATT
GATACGCTGG CAGCACAGCT CTATGACCGC CTGCTGGACG TCGACCCTTA TACCTATCGT
CTGATGCCAG AGCTGGCTCA GCGCTGGGAA GTGCTGGACA ACGGTTCGAC ATACCGTTTC
TATCTGCGCC GCGATGTGCT GTTTCAGCGT ACCGCATGGT TCAGCCCAAC CCGCAATATG
AACGCCGACG ACGTGATCTT CAGCTTCCAG CGCATGCTGG ACGAAAAGCA TCCGTATCAT
GATGTTAACG GCGGTGAGTA CCCCTATTTC GATAGCCTGC AATTCGCCGA TTCGGTACAA
AGCATCCGCA AACTAGGCGA GTATAGCGTT GAGATCCGCC TCAATAGCCC GGATGCGTCT
TTCCTCTGGC ATTTGGCCAC GCACTACGCA CCGATCCTGT CTGCGGAATA CGCGCAACGT
CTGGCAAAAG AGGACAAAAA GGAGCTGCTG GATCGCGAAC CAGTCGGTAC TGGCCCCTAT
CTGCTCAATG AATACCGCAA CGGGCAATAT ATCCGGCTGA CGCGCAACGA CGATTATTGG
CGCGGCCTGC CACGCATGCA GCAGGTCGTT GTCGATCTCG GTTCCGGCGG TACGGGTCGC
TTATCCAAGC TGCTGACAGG CGAATGTGAT GTCCTCGCCT ATCCGGCGGC TAGCCAGCTA
ACAATTCTGC GTAACGACCC TCGCCTGCGT CTCTCGCTGC GCCCTGGCAT GAACGTCGCC
TATCTGGCTT TCAACGTACG TAAACCCCCG TTGGATGACC GCCGCGTGCG GGAAGCCATC
GCACTGGCGA TCAATAACGA CAGGCTGATG CAGTCGATCT ATTACGGCAC GGCGGAAACC
GCAGCGTCGA TTCTGCCTCG CGCCTCATGG GCGTACGACA ATGAATCGCA GATTACGGAA
TATAACCCGC AGAAAGCGCG GCAAATCTTG CAGGATTTGG GGCTGACGAA CCTCAACCTG
CGCCTGTGGG TGCCCAGCGC CTCGCAGTCC TACAACCCCA GCCCGTTGAA AACGGCAGAG
TTGATACAGG CCGATCTGGC GCAGATTGGC GTTACCGTGA CCATTGTTCC GGTGGAAGGC
CGTTTTCAGG AGGCGCGGTT GATGGAACTC AGCCACGATT TAACGCTGGC GGGCTGGGCA
ACGGACAGTA ACGACCCGGA CAGCTTTTTC CGACCGCTGC TAAGCTGCGC GGCGATTCGC
TCCCAGAGCA ACTACGCGCA CTGGTGCGAT CCCACGTTTG ATGAAGTGCT GCAAAACGCG
CTCTCATCAC AACAGCTTTC TAAGCGGATT GACTATTATC AACAGGCACA GCGTATTCTG
GCAGAACAAT TACCCGTTCT GCCGCTGGCA TCGTCACTAC GACTACTGGC CTACCGCTAT
GACATGAAAG GGCTGGTATT GAGCCCGTTC GGCAATGCCT CGTTCGCGGG CGTCTTCCGC
GAGGATCAGC AGGCGCAGCA GAAACCCTCT GCACCGGAAA CCGTGGAGGA AGCACAGCCG
TGA
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| Protein sequence | MPRVRYTLCI TVLTEKSRMF GKTCFALAFT WLALPALAAS PSVPTSPAPL ESIHQSGFVY
CVNDVLNTFN PQMARSGVTI DTLAAQLYDR LLDVDPYTYR LMPELAQRWE VLDNGSTYRF
YLRRDVLFQR TAWFSPTRNM NADDVIFSFQ RMLDEKHPYH DVNGGEYPYF DSLQFADSVQ
SIRKLGEYSV EIRLNSPDAS FLWHLATHYA PILSAEYAQR LAKEDKKELL DREPVGTGPY
LLNEYRNGQY IRLTRNDDYW RGLPRMQQVV VDLGSGGTGR LSKLLTGECD VLAYPAASQL
TILRNDPRLR LSLRPGMNVA YLAFNVRKPP LDDRRVREAI ALAINNDRLM QSIYYGTAET
AASILPRASW AYDNESQITE YNPQKARQIL QDLGLTNLNL RLWVPSASQS YNPSPLKTAE
LIQADLAQIG VTVTIVPVEG RFQEARLMEL SHDLTLAGWA TDSNDPDSFF RPLLSCAAIR
SQSNYAHWCD PTFDEVLQNA LSSQQLSKRI DYYQQAQRIL AEQLPVLPLA SSLRLLAYRY
DMKGLVLSPF GNASFAGVFR EDQQAQQKPS APETVEEAQP
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