| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2337 |
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| Symbol | |
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| ID | 8133281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2686424 |
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| End bp | 2687941 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865618 |
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| Product | glycoside hydrolase family 5 |
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| Protein accession | YP_003017905 |
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| Protein GI | 253688715 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.422091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGATGA GAAGGAATCA AATCGTCAGG AAATTGACGT TAGGGGTGGT AACAACGGTG
CTGGGGATGT CGCTCAGTTT TTCTGCATTA TCCGCCACAC CGGTGGAAAC GCATGGTCAA
CTGTCCATTG AAAATGGGCG ACTGGTGGAC GAACAGGGGA AAAGGGTGCA ACTGAGAGGG
ATCAGTTCGC ACGGTTTGCA GTGGTTTGGT GACTACGTCA ACAAAGATTC GATGAAATGG
CTGCGTGATG ACTGGGGGAT TAACGTATTC CGTGTTGCCA TGTACACGGC AGCGGATGGC
TATATTTCCA ATCCTTCTCT CGCGAATAAG GTCAAAGAAG CCGTTGCGGC GGCACAAAGC
CTCGGCGTCT ACATCATCAT CGACTGGCAC ATTTTGTCGG ATAACGATCC TAATATTTAT
AAAGCACAGG CAAAAACCTT CTTTGCCGAA ATGGCGGGGC TGTACGGTAA TTCGCCGAAC
GTGATTTATG AAATCGCCAA TGAACCTAAC GGCGGCGTGA CATGGAACGG GCAAATTCGG
CCTTATGCGC TGGAAGTGAC TGAAACTATC CGTAGTAAAG ATCCTGATAA TCTGATTATC
GTTGGCACGG GTACCTGGAG TCAGGATATT CATGACGCGG CGGATAATCA ACTGCCCGAC
CCGAATACGC TGTACGCGCT GCATTTCTAT GCCGGTACGC ACGGGCAGTT CCTGCGCGAT
CGCATTGATT ATGCACAAAG CCGCGGTGCT GCGATTTTTG TCAGCGAGTG GGGGACAAGC
GATGCGTCCG GCAATGGCGG ACCGTTCCTG CCTGAATCGC AGACCTGGAT CGATTTCCTG
AATAACCGTG GTGTGAGCTG GGTTAACTGG TCGCTTAACG ATAAATCAGA AGCGTCTGCG
GCGCTGGCTC CGGGAGCGAG CAAAACAGGC GGTTGGACGG AGCAGAATCT GTCGACGTCA
GGCAAATTTG TCAGAGCACA GATTCGCGCG GCTGCGAATC TAAGCGGTGG CGATACGCCA
ACCACGCCAA CGGAACCGAC CAATCCAGGT AGCGGAACCA CGGGTGACGT CGTGCTGCAA
TATCGTAATG TGGATAACAA CCCTTCCGAT GATGCGATTC GCATGGCCGT CAACATCAAA
AATACCGGAA GTACGCCGAT CAAACTTAGC GATCTGCAAG TGCGCTACTA CTTCCATGAT
GATGGCAAAC CGGGTGCGAA CCTCTTTGTT GATTGGGCGA ATGTCGGCCC TAACAACATT
GTGACCAGCA CAGGTACGCC AGCCGCCAGT ACCGATAAAG CCAATCGCTA TGTTCTTGTG
ACCTTCAGCA GCGGAGCCGG TTCTCTTCAG CCGGGTGCAG AAACCGGTGA AGTGCAGGTG
CGTATCCACG CCGGAGACTG GAGCAACGTG AATGAAACGA ATGACTATTC ATACGGTGCT
AACGTCACGA GCTACACCAA CTGGGATAAG ATCACCGTAC ACGATAAAGG TAAGCTGATA
TGGGGCGTGG AGCCGTAA
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| Protein sequence | MWMRRNQIVR KLTLGVVTTV LGMSLSFSAL SATPVETHGQ LSIENGRLVD EQGKRVQLRG
ISSHGLQWFG DYVNKDSMKW LRDDWGINVF RVAMYTAADG YISNPSLANK VKEAVAAAQS
LGVYIIIDWH ILSDNDPNIY KAQAKTFFAE MAGLYGNSPN VIYEIANEPN GGVTWNGQIR
PYALEVTETI RSKDPDNLII VGTGTWSQDI HDAADNQLPD PNTLYALHFY AGTHGQFLRD
RIDYAQSRGA AIFVSEWGTS DASGNGGPFL PESQTWIDFL NNRGVSWVNW SLNDKSEASA
ALAPGASKTG GWTEQNLSTS GKFVRAQIRA AANLSGGDTP TTPTEPTNPG SGTTGDVVLQ
YRNVDNNPSD DAIRMAVNIK NTGSTPIKLS DLQVRYYFHD DGKPGANLFV DWANVGPNNI
VTSTGTPAAS TDKANRYVLV TFSSGAGSLQ PGAETGEVQV RIHAGDWSNV NETNDYSYGA
NVTSYTNWDK ITVHDKGKLI WGVEP
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