| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2335 |
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| Symbol | |
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| ID | 8133279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2684475 |
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| End bp | 2685140 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865616 |
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| Product | phage shock protein PspA |
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| Protein accession | YP_003017903 |
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| Protein GI | 253688713 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TTTCTCGTTT TGCCGACATC GTGAACGCCA ACATCAATTC ATTGCTGGAT
AAAGCTGAAG ATCCGCAGAA ATTGGTGCGG CTGATGATTC AGGAAATGGA AGATACGCTG
GTTGAAGTGC GTTCAACCTC GGCGCGGGCG TTGGCAGAAA AGAAACAGAT TGCCCGCCGT
ATTGAACAAG CGCATGGTCA GCAAGATCAG TGGCAGGAAA AAGCCGAGCT GGCACTGCGT
AAAGATAAAG ACGATTTGGC CCGTGCGGCG CTGATTGAAA AGCAGAAACT GACTGATCTG
ATCGCCGTAT TGCAGCATGA AGCCGAAAGC GTGGATGAAA CGCTGGATCG CATGAAGCGT
GAAATCGGCG AGCTGGAAAA CAAATTAAGT GAAACCCGCG CTCGCCAGCA GGCACTGACG
CTGCGTCATC AGGCTGCGGC ATCGTCGCGT GATGTGCGCC GCCAGTTGGA CAGCGGTAAG
CTGGACGAAG CGATGGCGCG TTTCGATCAG TTTGAACGCC GCATTGACAC GATGGAAGCG
GAAGCGGAAA GCCACGGTCT GGGGAAACAA AAATCGCTGG ATCAGCAGTT TGCCGAGCTG
AAAGCGGACG ATGAAATCAG CGCGCAGTTG GCGGCGCTTA AAGCTAAAGT TAAGCCAGCA
GAGTAA
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| Protein sequence | MGIFSRFADI VNANINSLLD KAEDPQKLVR LMIQEMEDTL VEVRSTSARA LAEKKQIARR
IEQAHGQQDQ WQEKAELALR KDKDDLARAA LIEKQKLTDL IAVLQHEAES VDETLDRMKR
EIGELENKLS ETRARQQALT LRHQAAASSR DVRRQLDSGK LDEAMARFDQ FERRIDTMEA
EAESHGLGKQ KSLDQQFAEL KADDEISAQL AALKAKVKPA E
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